DRSC/TRiP Functional Genomics Resources

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Protein Alignment Traf-like and Traf4

DIOPT Version :10

Sequence 1:NP_727976.1 Gene:Traf-like / 32611 FlyBaseID:FBgn0030748 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_319165.4 Gene:Traf4 / 1279446 VectorBaseID:AGAMI1_008008 Length:483 Species:Anopheles gambiae


Alignment Length:507 Identity:104/507 - (20%)
Similarity:187/507 - (36%) Gaps:115/507 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TKSSSRKDLTEQNQYQNQNENQNQPKSTTIVKY----------EKS---SCLFC------NEWFD 49
            |.:||...::..:...:.:.:...|.:..|.:.          ||:   |.:||      .:|.|
Mosquito    46 TSTSSASTMSSSSSPSSSSSSPTPPPNVPITEISQIIYPDPESEKAIMGSLVFCIHHKQGCKWSD 110

  Fly    50 -AQTFTEHLIHCGQVLEECPNGCQAFIPRIRMRSHLK-EC--PRNQHNLSNQQRMSVSMDRLDRQ 110
             .:....||..|.....:|||.|.:.|||:.|..||. .|  .|......|.:...:.::.....
Mosquito   111 ELRKLKAHLNTCKHDAIQCPNKCGSQIPRVMMTDHLAFTCILRRAICEFCNVEFTGIGLEEHAGT 175

  Fly   111 SDQRLLVIEQDVGTIRSVLNEEIRQRLHLITDVG-NIRKQNQVVEDWTRETEKAMDDLRRQMEEE 174
            .....:..|...||  .||..  |..:|...|.. .:|:......::..:|..|           
Mosquito   176 CSSEPIYCESKCGT--RVLRG--RMSIHRAKDCAKRLRRCPHCGREFCADTLAA----------- 225

  Fly   175 TNRKAFAIEQNQLDVQYCCDITQSLKEQVESRL-DEAQKLVNQLSADVTYHQNQLNDNILKLEEL 238
               ......::.:.....||.....:..:::.| ||.:    .|:...|:.:....         
Mosquito   226 ---HGATCPRSPIPCPQRCDAGPFARADLDAHLRDECK----ALTVPCTFKEAGCR--------- 274

  Fly   239 IFENERLNREKFFQIEEFLQQINEDIKTKLGNSDYVTSKQATLDYEVKNVKNIVCETEERCDKLD 303
             |:..|...|...:..                    ||...:|...:...:.             
Mosquito   275 -FKGPRHLLEAHLEAN--------------------TSAHLSLMVALSGRQG------------- 305

  Fly   304 RALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDTI-LHSAMFSNKAF 367
                   |.|:.|::.||   ::::  |..|.|:|:|.|:|.|::|:|..|.: |.|..|....:
Mosquito   306 -------QQINMLKSAMA---KLST--NYTGTLLWKITDWSVKMQEAKTKDGLELVSPPFYTSQY 358

  Fly   368 GYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQCT---------NVA 423
            ||.|:..::|||.|..:|.::...:.||.||||.||.||........:.:|.|         .||
Mosquito   359 GYKLQASMFLNGNGPGEGTHVSVYIKVLPGEYDALLKWPFSHSVTFTLFEQGTLGSGVGGQGGVA 423

  Fly   424 DA--EDYVKTIFVRKKSD-DFIQSNQYFHIPHKVITSRNYLRNDSMFIEVRV 472
            ::  .|.....|.|..:: |.:.......:.|:::..|.::|:|::|:.|:|
Mosquito   424 ESFVPDPTWENFQRPSTEPDALGFGFPRFVSHELLNRRPFVRDDTVFLRVKV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf-likeNP_727976.1 SMC_prok_B <131..>336 CDD:274008 26/206 (13%)
MATH_TRAF_C 334..473 CDD:238168 46/152 (30%)
Traf4XP_319165.4 None

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