DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18858 and lcat

DIOPT Version :10

Sequence 1:NP_652700.1 Gene:CG18858 / 326109 FlyBaseID:FBgn0042175 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001311336.1 Gene:lcat / 793137 ZFINID:ZDB-GENE-010716-3 Length:436 Species:Danio rerio


Alignment Length:421 Identity:143/421 - (33%)
Similarity:226/421 - (53%) Gaps:23/421 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSLLLLTTFLALGECFWPFSKWHGRNDNPSAPPEPK-------LSPVIFVPGDGGSQMDARLNKP 65
            ::|.|:......|  ||.|        |...||..|       ..|:|.|||:.|::::|:::||
Zfish    10 VALFLILLHQTSG--FWLF--------NVIFPPTAKPRVINNSTPPLIIVPGNLGNRLEAKIDKP 64

  Fly    66 NSPYLIC-QKTHDWYNLWLDLEQLVIPMVYCWIDNVKLYYDKVTRTTHNTPGVETRIPGWGNPEV 129
            ...:.:| :|:.||:.||:||...:...|.|||||:::.|::.||.|.|.|||:.|:||:|....
Zfish    65 TLVHWMCYKKSEDWFPLWIDLNMFMPIGVDCWIDNIRIVYNRTTRKTSNAPGVDVRVPGFGQTHP 129

  Fly   130 VEWIDPTKNSAGAYFKDIANELVKLGYIRKQNIHGAPYDFRKAPNENQQFFIDLKQLVEDSYEAN 194
            :|::|  .|....||..:...||.:||:|.:.:.|||||:|.||||.:::|..||.|||:.::..
Zfish   130 IEFLD--LNKLTGYFHTMVQHLVSIGYVRNETVRGAPYDWRIAPNEQEEYFSRLKNLVEEMHDEY 192

  Fly   195 NQSAVTFISHSMGSLMTLVFLQEQTLQWKAKYVKRMISLAGVWAGSFKAVKVFAMGD-DLDSFAL 258
            .| .|..:.|||||...|.||.:||..||..|:|..|||...|.|:.|.::|.|.|: |...|..
Zfish   193 KQ-PVYLLGHSMGSNYILYFLNQQTQDWKDHYIKGFISLGAPWGGAVKPLRVLASGENDGIPFVS 256

  Fly   259 SAKILKAEQITHPSTAWLLPSPLFWKPSEVLAMTPSRNYTMAQLEEFFKDLDYMTGWEMRKDTIR 323
            :.||.:.:::| .:..|::||...|........||..|||.....:||||:::..||.|..||..
Zfish   257 NIKIREEQRMT-TTNPWMIPSEETWPKDHTFISTPFFNYTNQDYMQFFKDINFEDGWYMWDDTRN 320

  Fly   324 YNRNFDPPNVELHCLYGEGIDTVERLQYKKSDISGETPKLIMGLGDGTVNQRSLRACKYWAGYSK 388
            .......|.||::||||.|:.|.....|.:...:.:...::...||.||:.||:..||.|.|..:
Zfish   321 LTAGLPAPGVEVYCLYGVGLPTPVTYIYDEQFPNADPIDILYDDGDDTVDSRSMSLCKRWIGKQE 385

  Fly   389 APINTLALQNVDHLHILSNPDVLKYIRTVMQ 419
            ..::....:.:.||.::.|...|..::.:::
Zfish   386 QAVHVTEFRGMPHLDMVFNHKSLTTVQRILE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18858NP_652700.1 alpha/beta hydrolases 81..405 CDD:473884 118/324 (36%)
lcatNP_001311336.1 alpha/beta hydrolases 81..405 CDD:473884 118/327 (36%)

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