DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18858 and LCAT

DIOPT Version :10

Sequence 1:NP_652700.1 Gene:CG18858 / 326109 FlyBaseID:FBgn0042175 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_000220.1 Gene:LCAT / 3931 HGNCID:6522 Length:440 Species:Homo sapiens


Alignment Length:409 Identity:136/409 - (33%)
Similarity:206/409 - (50%) Gaps:4/409 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLTTFLALGECFWPFSKWHGRNDNPSAPPEPKLSPVIFVPGDGGSQMDARLNKPNSPYLIC-QK 74
            |||...|.....||..:.....:..|.|.......|||.|||..|:|::|:|:||:....:| :|
Human    13 LLLGLLLPPAAPFWLLNVLFPPHTTPKAELSNHTRPVILVPGCLGNQLEAKLDKPDVVNWMCYRK 77

  Fly    75 THDWYNLWLDLEQLVIPMVYCWIDNVKLYYDKVTRTTHNTPGVETRIPGWGNPEVVEWIDPTKNS 139
            |.|::.:||||...:...|.|||||.::.|::.:....|.|||:.|:||:|....||::|.:|  
Human    78 TEDFFTIWLDLNMFLPLGVDCWIDNTRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSK-- 140

  Fly   140 AGAYFKDIANELVKLGYIRKQNIHGAPYDFRKAPNENQQFFIDLKQLVEDSYEANNQSAVTFISH 204
            ...|...:...||..||:|.:.:..||||:|..|.:.::::..|..|||:.:.|..: .|..|.|
Human   141 LAGYLHTLVQNLVNNGYVRDETVRAAPYDWRLEPGQQEEYYRKLAGLVEEMHAAYGK-PVFLIGH 204

  Fly   205 SMGSLMTLVFLQEQTLQWKAKYVKRMISLAGVWAGSFKAVKVFAMGDDLDSFALSAKILKAEQIT 269
            |:|.|..|.||..|...||.:::...|||...|.||.|.:.|.|.||:.....:|:..||.||..
Human   205 SLGCLHLLYFLLRQPQAWKDRFIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRI 269

  Fly   270 HPSTAWLLPSPLFWKPSEVLAMTPSRNYTMAQLEEFFKDLDYMTGWEMRKDTIRYNRNFDPPNVE 334
            ..::.|:.||.:.|....|...|||.|||....:.||.||.:..||.|...:.........|.||
Human   270 TTTSPWMFPSRMAWPEDHVFISTPSFNYTGRDFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVE 334

  Fly   335 LHCLYGEGIDTVERLQYKKSDISGETPKLIMGLGDGTVNQRSLRACKYWAGYSKAPINTLALQNV 399
            ::||||.|:.|.....|.......:...::...||.||..||...|..|.|....|::.|.|..:
Human   335 VYCLYGVGLPTPRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVHLLPLHGI 399

  Fly   400 DHLHILSNPDVLKYIRTVM 418
            .||:::.:...|::|..::
Human   400 QHLNMVFSNLTLEHINAIL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18858NP_652700.1 alpha/beta hydrolases 81..405 CDD:473884 110/323 (34%)
LCATNP_000220.1 LCAT 83..408 CDD:396835 110/327 (34%)

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