DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18858 and Lcat

DIOPT Version :10

Sequence 1:NP_652700.1 Gene:CG18858 / 326109 FlyBaseID:FBgn0042175 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_058720.2 Gene:Lcat / 24530 RGDID:2993 Length:440 Species:Rattus norvegicus


Alignment Length:410 Identity:134/410 - (32%)
Similarity:202/410 - (49%) Gaps:4/410 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLLTTFLALGECFWPFSKWHGRNDNPSAPPEPKLSPVIFVPGDGGSQMDARLNKPNSPYLIC-Q 73
            ||||...|.....||..:.....:..|.|.......|||.|||..|::::|:|:|||....:| :
  Rat    12 LLLLGLLLPPATSFWLLNVLFPPHTTPKAELSNHTRPVILVPGCMGNRLEAKLDKPNVVNWLCYR 76

  Fly    74 KTHDWYNLWLDLEQLVIPMVYCWIDNVKLYYDKVTRTTHNTPGVETRIPGWGNPEVVEWIDPTKN 138
            ||.|::.:|||....:...|.|||||.::.|::.:....|.|||:.|:||:|....||::|  .|
  Rat    77 KTEDFFTIWLDFNMFLPLGVDCWIDNTRVVYNRSSGHMSNAPGVQIRVPGFGKTYSVEYLD--DN 139

  Fly   139 SAGAYFKDIANELVKLGYIRKQNIHGAPYDFRKAPNENQQFFIDLKQLVEDSYEANNQSAVTFIS 203
            ....|...:...||..||:|.:.:..||||:|.||.:..:::..|..|||:.|.|..: .|..|.
  Rat   140 KLAGYLHTLVQNLVNNGYVRDETVRAAPYDWRLAPRQQDEYYQKLAGLVEEMYAAYGK-PVFLIG 203

  Fly   204 HSMGSLMTLVFLQEQTLQWKAKYVKRMISLAGVWAGSFKAVKVFAMGDDLDSFALSAKILKAEQI 268
            ||:|.|..|.||..|...||..::...|||...|.||.|.:::.|.||:.....:|...|:.||.
  Rat   204 HSLGCLHVLHFLLRQPQSWKDHFIDGFISLGAPWGGSIKPMRILASGDNQGIPIMSNIKLREEQR 268

  Fly   269 THPSTAWLLPSPLFWKPSEVLAMTPSRNYTMAQLEEFFKDLDYMTGWEMRKDTIRYNRNFDPPNV 333
            ...::.|:.|:...|....|...||:.|||....|.||.||.:..||.|...:.........|.|
  Rat   269 ITTTSPWMFPAHHVWPEDHVFISTPNFNYTGQDFERFFADLHFEEGWHMFLQSRDLLAGLPAPGV 333

  Fly   334 ELHCLYGEGIDTVERLQYKKSDISGETPKLIMGLGDGTVNQRSLRACKYWAGYSKAPINTLALQN 398
            |::||||.|:.|.....|..:....:....:...||.||..||...|..|.|.....::.|.:..
  Rat   334 EVYCLYGVGMPTAHTYIYDHNFPYKDPVAALYEDGDDTVATRSTELCGQWQGRQSQAVHLLPMNG 398

  Fly   399 VDHLHILSNPDVLKYIRTVM 418
            .|||:::.:...|::|..::
  Rat   399 TDHLNMVFSNKTLEHINAIL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18858NP_652700.1 alpha/beta hydrolases 81..405 CDD:473884 107/323 (33%)
LcatNP_058720.2 alpha/beta hydrolases 83..408 CDD:473884 107/327 (33%)

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