DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4301 and Atp8b3

DIOPT Version :10

Sequence 1:NP_573125.1 Gene:CG4301 / 32610 FlyBaseID:FBgn0030747 Length:1342 Species:Drosophila melanogaster
Sequence 2:NP_001419373.1 Gene:Atp8b3 / 299616 RGDID:1307622 Length:1340 Species:Rattus norvegicus


Alignment Length:1427 Identity:372/1427 - (26%)
Similarity:616/1427 - (43%) Gaps:394/1427 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AHRQTPWADQESFHLKDAFLWN-------WHKGSRVSTINDWLQIQIGGPQDIKKKRPKGQNRIK 77
            ||.:....|:::     .|.|.       :||..|......|.|         ||.:   .|.|.
  Rat     4 AHLEEDLEDKDT-----EFTWEVKANDRAYHKQFRKKGFLCWRQ---------KKYK---SNAIH 51

  Fly    78 STKYTLITFLPQNLLEQFRRIANFYFLVMTIISLLIDSPVSP-MTSLLPLVFVIAVTAAKQGYED 141
            :.||.:.:|||.||.|||||::|.|||.:.|:..:.:....| .|...|||.::.:.||:...:|
  Rat    52 TAKYNVFSFLPLNLYEQFRRVSNLYFLFIIILQSIPEISTLPWFTLFAPLVCLLMIRAARDLVDD 116

  Fly   142 ILRYRTDNVVNSSPVTVIRDGKEAIIKS-QDVIPGELIVVERDCDVPCDLVLLRSTDPHGKCFIT 205
            |.|:|:|.::|:.|..::: ||..:.|. :::..|:::.:.:|..||.||:||.||:|...|::.
  Rat   117 IGRHRSDRIINNRPCQILK-GKSFLWKKWKNLCVGDVVCLSKDNIVPADLLLLASTEPSSLCYLE 180

  Fly   206 TANLDGESNLK---TLMVPRDLPTVDLPEMHKL----GIIECESPTTDLYSFNGKIELKGGEGRV 263
            ||::|||:|||   .|||...    :|....|:    ||:.||.|.:.::.|.|.:|   ...|.
  Rat   181 TADIDGETNLKFRQALMVTHH----ELTSPKKMASFQGIVTCEEPNSRMHHFVGSLE---WNSRK 238

  Fly   264 LPLSTENVLLRGSRVKNTECVIGCAVYTGMISKLQLNSRLTRNKNASSETYINRFLIVILVALIA 328
            .||...|:||||.:::||:...|..:|.|:.:|:..|......|....:..:|:.:|:|.::|:.
  Rat   239 YPLDIGNLLLRGCKIRNTDTCYGLVIYAGLDTKIMKNCGKIHLKRTKLDLMMNKLVILIFMSLVI 303

  Fly   329 IVTLL-----YFLKRYNELFVIPKLTYLG------DATDSYSVKQFLQDYLSFLILFNYLIPISL 382
            ....|     :.:|.:.     .|..|:.      ||.||:.:      :..||||.:.::|:::
  Rat   304 ASMFLTLGFAFMVKEFK-----AKHHYMSSMQGRTDAMDSFFI------FWGFLILLSVMVPMAM 357

  Fly   383 YVTIELQRVIGSWFMEWDLELYENETDQPCVVNTSNLNEELGQINILFSDKTGTLTKNEMNFQQC 447
            ::..|...:..|.|:.|||.:|....|.|....:::||:.|||:..:|||||||||:|.|.|::|
  Rat   358 FIIAEFIYLGNSIFINWDLSMYYEPLDIPAKARSTSLNDHLGQVQYIFSDKTGTLTQNIMTFKKC 422

  Fly   448 SINGNKFLFKKTRLEDEETKALLDINKFSANQRVFFQALSICHTVQVASGSLEQADAGTAKREPV 512
            .|||                                     |                       
  Rat   423 CING-------------------------------------C----------------------- 427

  Fly   513 TAIKSGPPEMYSISDITEESHNASQQSELNVGHTIDNSVSAHPNGVNSTIISSDVNPLLVSDDGY 577
                                             |.|                        |||.:
  Rat   428 ---------------------------------TYD------------------------SDDEH 435

  Fly   578 GVERRKRPVVIKRSPNFARSNRMNNGAASDLNINQTDPNTVTNGVEPTTNFRPISLQFRRSTSEK 642
            |..|::.|.                           ..|...:|          .|||    ..|
  Rat   436 GTLRKRNPY---------------------------SWNPFADG----------KLQF----YNK 459

  Fly   643 DLQQSWEAPSGQAPGHRRAHSYGAPNAYLTNPVTASTPPAGVLFRSPSTTSRESYAAPTFTRQPT 707
            :|:.                                      |.|     .::..|...|.|...
  Rat   460 ELES--------------------------------------LVR-----GKQDRAVQEFWRLLA 481

  Fly   708 ILVRAESQRRKNEIRDFIFTLDYQASSPDEKALVEACANLGMVYTGDDDETLRVRIVPPHMDYKR 772
            |......|.:.|:       |.|||:||||:|||.|..|.|.|:.....:|:.:           
  Rat   482 ICHTVMVQEKDNQ-------LLYQAASPDEEALVAAARNFGYVFLSRTQDTITL----------- 528

  Fly   773 PFAKPREETFQRLHVLEFTSDRKRMSVIVRDTDGKKWIYTKGAESYVFPLCANSSAELVTKTDAH 837
             .....|..:|.|.:::|.|.||||||:||:.:|...:|||||::.:.....:......| |:..
  Rat   529 -VELGEERVYQVLAMMDFNSVRKRMSVLVRNPEGSICLYTKGADTVILERLHHKGVMEAT-TEEV 591

  Fly   838 ISDFARLGLRTLAIARRLISEEEYQDFLVELAQANSSLENRKQLSEECYAKIESNLDLLGATAVE 902
            ::.||...||||.:|.:.::|:.|:::..|..:|...|:||.|...:.|.|:|.||.|||.||:|
  Rat   592 LAAFAEQTLRTLCLAYKDVAEDAYKEWEPEHQEAALLLQNRAQALHQVYNKLEQNLQLLGVTAIE 656

  Fly   903 DALQDDVADTLVSLQAAGIKIWVLTGDKVETALNIALSCGHIPPDAKKYFIMECKN--------- 958
            |.|||.|.:|:..|:...||:|||||||.|||:||..:|..:   ::...|:|.|:         
  Rat   657 DKLQDGVPETIRCLKKGNIKMWVLTGDKPETAVNIGFACQLL---SENMSILEDKDIKGLLENYW 718

  Fly   959 -------------REEMLLHLNA--LDREIIFGIGQECALLIDG--------------------- 987
                         ...|.|.:|.  || :::..:.:|...|:..                     
  Rat   719 DENEHQRAFQTMTHHNMALVINGEFLD-QLLLSLRKEPRALVQNAVVDEATQEPGVSALDFLQAR 782

  Fly   988 ------KSLGVALAEASSE---------------FRDVAVKCTAVLCCRLSPLQKSEVVSLIKSS 1031
                  ::.|..:|.:.|:               |.|:|.||.||:|||::|.||:.||:|:| .
  Rat   783 RISQMWRNFGTTMATSQSDASKTRESPEERRERAFVDLASKCQAVICCRVTPKQKALVVALVK-K 846

  Fly  1032 NENYNTASIGDGANDVSMIQEAHVGIGIMGREGRQAARCADFAFAKFCMLKRLLLVHGHYHSVRL 1096
            .:...|.:||||||||:||:.|.:|:|:.|:||.||.:.:|:..|:||.|:|||||||.:..:|:
  Rat   847 YQQVVTLAIGDGANDVNMIKTADIGVGLAGQEGMQAVQNSDYVLAQFCYLQRLLLVHGRWSYMRI 911

  Fly  1097 SLLVLYFFYKNIVFMGIMFLFQFHTLFSSSSVYDSLFLTLYNVIYTSLPILFIAISEKPYTEEKL 1161
            ...:.|||||.:..|.....|.....||:..:|:..||.|:|::|::||:|:|.:.|:..|.||.
  Rat   912 CKFLRYFFYKTVASMMAQIWFSLFNGFSAQPLYEGWFLALFNLLYSTLPVLYIGLFEQDVTAEKS 976

  Fly  1162 MRTPQLYKKNTDNKQLHWPYFLMWVLFAIYHSVIIFYFAFCFFYYNNVLLNY-----GQTVAFSC 1221
            ::.|:||.....::..::..|:.    ||.|..|.....|    :..:|::|     |.:..:..
  Rat   977 LKMPELYTAGQKDELFNYSIFVQ----AIAHGTITSLINF----FVTILVSYDMTKTGSSPDYQS 1033

  Fly  1222 FGTLLMWTVVVVVNLKLWLESMYLSFWYIFTIIISILGFVVTTVIYNVINL-------------D 1273
            ||.|:..:.::.:.|::.|...|.:..::.|:::|:..:|:.|.:...:.|             |
  Rat  1034 FGVLVAISSLLSITLEVILVVKYWTLLFVGTVVVSLSSYVIFTSLTESLLLFRISPKTFPFLFAD 1098

  Fly  1274 YDTDIYWAYNNLLASLPVWLWIIVTCVACLVPDYTIRMLQRALNIKSFSIFPGKQRKLKMRE 1335
            |         |::......|.|::......:|...:|:::|.:    ....|.|:.::...|
  Rat  1099 Y---------NVIREPSSLLVIVLNVTLNTLPMLAVRIIRRTV----LKRHPKKEEEVPSEE 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4301NP_573125.1 Haloacid Dehalogenase-like Hydrolases 74..1317 CDD:473868 357/1346 (27%)
Atp8b3NP_001419373.1 P-type_ATPase_APLT_Dnf-like 47..1015 CDD:319770 335/1220 (27%)

Return to query results.
Submit another query.