DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4301 and Atp8a1

DIOPT Version :9

Sequence 1:NP_573125.1 Gene:CG4301 / 32610 FlyBaseID:FBgn0030747 Length:1342 Species:Drosophila melanogaster
Sequence 2:XP_038948654.1 Gene:Atp8a1 / 289615 RGDID:1309619 Length:1209 Species:Rattus norvegicus


Alignment Length:1344 Identity:428/1344 - (31%)
Similarity:630/1344 - (46%) Gaps:326/1344 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GFRRIDRLGAHRQTPWADQESFHLKDAFLWNWHKGSRVSTINDWLQIQIGGPQDIKKKRPKGQNR 75
            |:.:.|.:.  .:|..||||                .|.|      |.|..||..|    ...|.
  Rat    62 GYEKTDDVS--EKTSLADQE----------------EVRT------IFINQPQLTK----FCNNH 98

  Fly    76 IKSTKYTLITFLPQNLLEQFRRIANFYFLVMTIISLLID-SPVSPMTSLLPLVFVIAVTAAKQGY 139
            :.:.||.:|||||:.|..||||.||.:||.:.::..:.| ||....|:|:||:|::||.|.|:..
  Rat    99 VSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 163

  Fly   140 EDILRYRTDNVVNSSPVTVIRDGKEAIIKSQDVIPGELIVVERDCDVPCDLVLLRSTDPHGKCFI 204
            |||.|::.||.||.....|:|:|...|:..:.|..|::::::....:|.|.|||.|::|...|:|
  Rat   164 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEFIPADTVLLSSSEPQAMCYI 228

  Fly   205 TTANLDGESNLKTLMVPRDLP-TVDLPEMHKL----GIIECESPTTDLYSFNGKIELKGGEGRVL 264
            .|:|||||:|||   :.:.|| |.|:.::..|    |.||||||...||.|.|.|.| .|.|.| 
  Rat   229 ETSNLDGETNLK---IRQGLPATSDIKDIDSLMRISGRIECESPNRHLYDFVGNIRL-DGHGTV- 288

  Fly   265 PLSTENVLLRGSRVKNTECVIGCAVYTGMISKLQLNS-----RLTRNKNASSETYINRFLIVILV 324
            ||..:.:||||::::||:.|.|..||||..:||..||     :|:..:..::...:..|.|:|.:
  Rat   289 PLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAM 353

  Fly   325 ALIAIVTLLYFLKRYNELFVIPKLTYLGDATDSYSVKQFLQDYLSFLILFNYLIPISLYVTIELQ 389
            :|:..|....:.:|::.......|.|.|       ...|..::|:|:||||.||||||.||:|:.
  Rat   354 SLVCSVGSAIWNRRHSGKDWYLHLHYGG-------ASNFGLNFLTFIILFNNLIPISLLVTLEVV 411

  Fly   390 RVIGSWFMEWDLELYENETDQPCVVNTSNLNEELGQINILFSDKTGTLTKNEMNFQQCSINGNKF 454
            :...::|:.|||:::...||...:..||||||||||:..:|||||||||.|.|.|::|:|.|   
  Rat   412 KFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAG--- 473

  Fly   455 LFKKTRLEDEETKALLDINKFSANQRVFFQALSICHTVQVASGSLEQADAGTAKREPVTAIKSGP 519
                                                   ||.|.:.:                  
  Rat   474 ---------------------------------------VAYGHVPE------------------ 481

  Fly   520 PEMYSISDITEESHNASQQSELNVGHTIDNSVSAHPNGVNSTIISSDVNPLLVSDDGYGVERRKR 584
            ||.|..|....:|.....:...|....::|..:.||..                           
  Rat   482 PEDYGCSPDEWQSSQFGDEKTFNDPSLLENLQNNHPTA--------------------------- 519

  Fly   585 PVVIKRSPNFARSNRMNNGAASDLNINQTDPNTVTNGVEPTTNFRPISLQFRRSTSEKDLQQSWE 649
            |::.:                                                            
  Rat   520 PIICE------------------------------------------------------------ 524

  Fly   650 APSGQAPGHRRAHSYGAPNAYLTNPVTASTPPAGVLFRSPSTTSRESYAAPTFTRQPTILVRAES 714
                                :||......|                  |.|              
  Rat   525 --------------------FLTMMAVCHT------------------AVP-------------- 537

  Fly   715 QRRKNEIRDFIFTLDYQASSPDEKALVEACANLGMVYTGDDDETLRVRIVPPHMDYKRPFAKPRE 779
             .|..|      .:.|||:||||.|||.|...|..|:||...:::.:.            :..:|
  Rat   538 -ERDGE------KIIYQAASPDEGALVRAAKQLNFVFTGRTPDSVIID------------SLGQE 583

  Fly   780 ETFQRLHVLEFTSDRKRMSVIVRDTDGKKWIYTKGAESYVFPLCANSS--AELVTKTDAHISDFA 842
            |.::.|:||||||.||||||:||...||..:|.|||::.::...|.||  .|:..|   |:..||
  Rat   584 ERYELLNVLEFTSSRKRMSVVVRTPSGKLRLYCKGADTVIYERLAESSKYKEITLK---HLEQFA 645

  Fly   843 RLGLRTLAIARRLISEEEYQDFLVELAQANSSLENRKQLSEECYAKIESNLDLLGATAVEDALQD 907
            ..|||||..|...|||.:::::.....:|::|::||....||.|..||.||.||||||:||.|||
  Rat   646 TEGLRTLCFAVAEISESDFEEWRAVYQRASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQD 710

  Fly   908 DVADTLVSLQAAGIKIWVLTGDKVETALNIALSCGHIPPDAKKYFIMECK---NREEMLLHL--- 966
            .|.:|:.:|..|.||||:|||||.|||:||..||..:..:.....|.|..   .||.:..|.   
  Rat   711 QVPETIETLMKADIKIWILTGDKQETAINIGHSCRLLRRNMGMIVINEGSLDGTRETLSRHCTTL 775

  Fly   967 -NALDREIIFGIGQECALLIDGKSLGVALAEASSE-FRDVAVKCTAVLCCRLSPLQKSEVVSLIK 1029
             :||.:|      .:.||:||||:|..||.....: |.|:|:.|.||:|||:|||||||||.::|
  Rat   776 GDALRKE------NDFALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVK 834

  Fly  1030 SSNENYNTASIGDGANDVSMIQEAHVGIGIMGREGRQAARCADFAFAKFCMLKRLLLVHGHYHSV 1094
             ......|.:||||||||||||.||||:||.|.||.|||..:|::.|:|..||.||:|||.::..
  Rat   835 -KQVKVITLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYN 898

  Fly  1095 RLSLLVLYFFYKNIVFMGIMFLFQFHTLFSSSSVYDSLFLTLYNVIYTSLPILFIAISEKPYTEE 1159
            |:|..:||.||||||...|...|.|...||...:::...:.||||::|::|.|.:.|.|:...:|
  Rat   899 RVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKE 963

  Fly  1160 KLMRTPQLYKKNTDNKQLHWPYFLMWV--LFAIYHSVIIFYFAFCFFYYNNVLLNYGQTVAFSCF 1222
            .:::.|:|||  |....|.:...:.||  |..::||||:|:|......|..|..| |:|..:...
  Rat   964 NMLKYPELYK--TSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTVFGN-GKTSDYLLL 1025

  Fly  1223 GTLLMWTVVVVVNLKLWLESMYLSFWYIFTIIISILGFVVTTVIYNVINLDYDTDIYWAYNNLLA 1287
            |..:...||:.|.||..||:   |:|..|: .|:|.|.:...|::           :..|::|..
  Rat  1026 GNFVYTFVVITVCLKAGLET---SYWTWFS-HIAIWGSIALWVVF-----------FGIYSSLWP 1075

  Fly  1288 SLPV-----------------WLWIIVTCVACLVPDYTIRMLQR 1314
            ::|:                 |:.::...||.|:.|...::::|
  Rat  1076 AVPMAPDMSGEAAMLFSSGVFWVGLLSIPVASLLLDVLYKVIKR 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4301NP_573125.1 PhoLip_ATPase_N 57..121 CDD:292826 25/64 (39%)
ATPase-Plipid 74..1317 CDD:273734 414/1281 (32%)
E1-E2_ATPase 127..>345 CDD:278548 83/227 (37%)
Cation_ATPase <734..823 CDD:289987 35/88 (40%)
HAD_like <1036..1066 CDD:304363 22/29 (76%)
PhoLip_ATPase_C 1068..1317 CDD:292829 80/266 (30%)
Atp8a1XP_038948654.1 ATPase-Plipid 94..1131 CDD:273734 414/1284 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D587717at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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