DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4301 and tat-1

DIOPT Version :10

Sequence 1:NP_573125.1 Gene:CG4301 / 32610 FlyBaseID:FBgn0030747 Length:1342 Species:Drosophila melanogaster
Sequence 2:NP_001255165.1 Gene:tat-1 / 176666 WormBaseID:WBGene00013034 Length:1192 Species:Caenorhabditis elegans


Alignment Length:1300 Identity:379/1300 - (29%)
Similarity:573/1300 - (44%) Gaps:355/1300 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 NRIKSTKYTLITFLPQNLLEQFRRIANFYFLVMTIISLLID-SPVSPMTSLLPLVFVIAVTAAKQ 137
            |||.:.||...:|||:.|.|||||..|.:||.:.::..:.| ||....|:.:|.:.:::|:|.|:
 Worm    31 NRISTCKYNGFSFLPRFLYEQFRRYNNIFFLAIALLQQIPDVSPTGRYTTAVPFLIILSVSALKE 95

  Fly   138 GYEDILRYRTDNVVNSSPVTVIRDGKEAIIKSQDVIPGELIVVERDCDVPCDLVLLRSTDPHGKC 202
            .:||:.|.|:||.||:..|.::.||.....:.:||..|:.|.::.|...|.||:||.|::..|..
 Worm    96 IFEDVKRRRSDNKVNAFSVEILVDGHWIEKQWKDVSVGDFIRIDNDSLFPADLLLLASSEQQGMA 160

  Fly   203 FITTANLDGESNLKTLMVPRDLPTVDLPEMHKLGIIE----CESPTTDLYSFNGKIELKGGEGRV 263
            :|.|:|||||:|||.........|:..||  ||...|    ||.|:..:..|||.||:.|.... 
 Worm   161 YIETSNLDGETNLKIKQALDITSTMTSPE--KLSQFESEITCEPPSRHVNEFNGNIEINGVARH- 222

  Fly   264 LPLSTENVLLRGSRVKNTECVIGCAVYTGMISKLQLNSRLTRNKNASSETYINR---FLIVILVA 325
              ...:.:||||:|:|||..:.|..:|||..|||.:||:....|:.:.:...|.   ||..:|||
 Worm   223 --FGIDQLLLRGARLKNTAWIFGAVIYTGHDSKLLMNSKRAPLKSGTIDVQTNYRIIFLFFVLVA 285

  Fly   326 LIAIVTLLYFLKRYNELFVIPKLTYLG----DATDSYSVKQFLQDYLSFLILFNYLIPISLYVTI 386
            |..|......:.|.|.   ||:..||.    |...|     ||...|:|.||:|.||||||.||:
 Worm   286 LALISATGSEIWRGNN---IPQAWYLSFLEHDPKGS-----FLWGVLTFFILYNNLIPISLQVTL 342

  Fly   387 ELQRVIGSWFMEWDLELYENETDQPCVVNTSNLNEELGQINILFSDKTGTLTKNEMNFQQCSING 451
            |:.|...:.::..|:|:|:..:|...:..||||||||||:..:.||||||||:|.|.|::.||..
 Worm   343 EVVRFFQAIYINNDIEMYDVNSDSCAIARTSNLNEELGQVKFIMSDKTGTLTRNVMKFKRLSIGS 407

  Fly   452 NKF------------LFKKTRLEDEETKALLDINKFSANQRVFFQALSICHTVQVASGSLEQADA 504
            ..:            |.:..|..||.:.::|::.|.          :::||||            
 Worm   408 RNYGNNEDDEFADASLIEDYRQGDEHSTSILEVLKM----------MAVCHTV------------ 450

  Fly   505 GTAKREPVTAIKSGPPEMYSISDITEESHNASQQSELNVGHTIDNSVSAHPNGVNSTIISSDVNP 569
                          .||                                                
 Worm   451 --------------VPE------------------------------------------------ 453

  Fly   570 LLVSDDGYGVERRKRPVVIKRSPNFARSNRMNNGAASDLNINQTDPNTVTNGVEPTTNFRPISLQ 634
                                                                             
 Worm   454 ----------------------------------------------------------------- 453

  Fly   635 FRRSTSEKDLQQSWEAPSGQAPGHRRAHSYGAPNAYLTNPVTASTPPAGVLFRSPSTTSRESYAA 699
                  .||         ||                                             
 Worm   454 ------NKD---------GQ--------------------------------------------- 458

  Fly   700 PTFTRQPTILVRAESQRRKNEIRDFIFTLDYQASSPDEKALVEACANLGMVYTGDDDETLRVRIV 764
                                        |.||:|||||.|||...|:          :::.....
 Worm   459 ----------------------------LIYQSSSPDEAALVRGAAS----------QSVSFHTR 485

  Fly   765 PPHMDYKRPFAKPREETFQRLHVLEFTSDRKRMSVIVRD-TDGKKWIYTKGAESYVFPLC--ANS 826
            .|.......|.:  :||.:.|.|::|||||||||||||| ..|...:|||||::.:|...  ...
 Worm   486 QPQKVICNVFGE--DETIEILDVIDFTSDRKRMSVIVRDGAGGDIKLYTKGADTVIFERLEHGKE 548

  Fly   827 SAELVTKTDAHISDFARLGLRTLAIARRLISEEEYQDFLVELAQANSSLENRKQLSEECYAKIES 891
            ..|.|.....|:.|:|..|.|||..:.|.::|:||..:..|..:|..:::||.:|..:...|:|.
 Worm   549 QEEAVEYCTEHLEDYASFGYRTLCFSMRHLTEQEYSQWAPEYKKAILAIDNRAKLLADAAEKLER 613

  Fly   892 NLDLLGATAVEDALQDDVADTLVSLQAAGIKIWVLTGDKVETALNIALSCGHIPPDAKKYFIMEC 956
            |:.|:||||:||.||:.|.:|:.:|.||.|::|:|||||.|||:|||.||.            .|
 Worm   614 NMILVGATAIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIAHSCA------------LC 666

  Fly   957 KNREEMLL--------HLNALDREIIFGIGQE-----CALLIDGKSLGVAL-AEASSEFRDVAVK 1007
            ....|:|:        ....|::.:...|..|     .|::||||||..|| .||...|.|:|::
 Worm   667 HTNTELLIVDKTTYEETYQKLEQFVARAIELEKQEKGFAMVIDGKSLLHALTGEARKHFGDLALR 731

  Fly  1008 CTAVLCCRLSPLQKSEVVSLIKSSNENYNTASIGDGANDVSMIQEAHVGIGIMGREGRQAARCAD 1072
            |.||:|||:||:||:|||.:::...::. ..:||||||||:|||.|:||:||.|.||.|||..:|
 Worm   732 CHAVVCCRMSPMQKAEVVEMVRKLAKHV-VLAIGDGANDVAMIQAANVGVGISGEEGLQAASASD 795

  Fly  1073 FAFAKFCMLKRLLLVHGHYHSVRLSLLVLYFFYKNIVFMGIMFLFQFHTLFSSSSVYDSLFLTLY 1137
            :|..:|..|:|||||||.::..|...::||.|||||....|...|...:.:|..::::...:.::
 Worm   796 YAIPRFHFLRRLLLVHGAWNHDRSVKVILYSFYKNICLYIIELWFAMFSAWSGQTIFERWTIGMF 860

  Fly  1138 NVIYTSLPILFIAISEKPYTEEKLMRTPQLYKKNTDNKQLHWPYFLMWVLFAIYHSVIIFYFAFC 1202
            |||:|:.|.:.:.:.:.|...|::|:.|.|| .:..|:......|.:|:..||.||:.:|:..:.
 Worm   861 NVIFTAWPPVVLGLFDHPVPAEQIMKYPALY-ASFQNRAFSIGNFSLWIGLAIVHSLSLFFLTYA 924

  Fly  1203 FFYYNNVLLN-------------YGQTVAFSCFGTLL---MWTVVVVV----NLKLWLESMYLSF 1247
            ...:..|..|             |...||..||..||   .||..|||    ::.||     :.|
 Worm   925 TMEHQVVWDNGLTGGWLMLGNCAYTFVVATVCFKALLECDSWTWPVVVACIGSIGLW-----IVF 984

  Fly  1248 WYIFTIIISILGFVVTTVIYNVINLDYDTDIYWAYNNLLASLPVWLWIIVTCVACLVPDYTIRML 1312
            ..:::::...:|.:             ..|:......:::|...||.::...:|.|:.|..|:.|
 Worm   985 VIVYSLVFPHIGGI-------------GADMAGMAAIMMSSYTFWLALLFIPLATLLWDLVIKSL 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4301NP_573125.1 Haloacid Dehalogenase-like Hydrolases 74..1317 CDD:473868 378/1299 (29%)
tat-1NP_001255165.1 P-type_ATPase_APLT_Dnf-like 30..922 CDD:319770 352/1166 (30%)
MelB <831..>1032 CDD:441813 48/219 (22%)

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