DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mei-41 and Pik3c2a

DIOPT Version :9

Sequence 1:NP_523369.2 Gene:mei-41 / 32608 FlyBaseID:FBgn0004367 Length:2517 Species:Drosophila melanogaster
Sequence 2:NP_001101970.1 Gene:Pik3c2a / 361632 RGDID:1310389 Length:1687 Species:Rattus norvegicus


Alignment Length:1113 Identity:200/1113 - (17%)
Similarity:375/1113 - (33%) Gaps:367/1113 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1542 LEQFTFLVEVYGSLRDPDSVEGAVQVRSYDMSVT---QDILVNRLVERQQDMITSYEQLLSSTDQ 1603
            |:..||........|..:..|..|.:..|...:.   ::::....||   :::.||...:....|
  Rat   507 LQLLTFSAMCQNLARTAEDDEAPVDLNKYLYQIEKPYKEVMTRHPVE---ELLDSYHYQVELALQ 568

  Fly  1604 MQPDHVRAMIDAYLRDTPKTAQLIADGLWQRLSDRYSDQCFAECKSEL-----LWRLGSYDEMEE 1663
            .:..| || ||..::...|....: ||:        ......|...:|     |.|..|.|....
  Rat   569 TENQH-RA-IDQVIKAVRKICSAL-DGV--------ETPAVTEAVKKLKRAVNLPRNKSADVTSL 622

  Fly  1664 LQSNWPAQCSQGCLKLRRPLTTRIEFDSLLDGMRESVLEELRSC-----------------SAVQ 1711
            ...:.....::|.|.|..|:  ::..|.|...:.:.:.....||                 :|.:
  Rat   623 SGGDTSKNSTRGSLNLENPV--QVSMDHLTAAIYDLLRLHTNSCKSSTVCPQGSRNIKEAWTATE 685

  Fly  1712 Q------------HSYANAYDAVLKLHLVHEL-HCSQELVEKLEQDRDEDNQEKLMKNYF--DDW 1761
            |            .::.:.|:   |.:|:..| |..::|.:.:     :..:....||:|  ..|
  Rat   686 QLQFTVYAAHGISSNWVSNYE---KYYLICSLSHNGKDLFKPI-----QSKKVGTYKNFFYLIKW 742

  Fly  1762 Q----YRLQIVQ-------------------------------PQV--RIQESIYSFRRNILAEL 1789
            .    :.:||.|                               |:.  ::..:::.|:|.:..  
  Rat   743 DELIIFPIQISQLPLESVLHLTLFGVLNQSSGSSPDSNKQRKGPEALGKVSLTLFDFKRFLTC-- 805

  Fly  1790 QRRLTDRNHLLPHLKTELARIWLNSAQINRNAGQLQRAQLYILKAAEYQ---PSGLFIERAKLLW 1851
                          .|:|..:| .|:..|...|.:.: :.|:::....|   ||..|        
  Rat   806 --------------GTKLLYLW-TSSHTNSIPGAIPQ-KSYVMERIVLQVDFPSPAF-------- 846

  Fly  1852 QKGDQVMAMNYLEEQLSIMRSGCQGNVKQLAAEQRHLFFRGKYLQAVYSAESMHLCAD--AVL-- 1912
               |.:.....::..:          ::|...|......:||.|..|:...|..|..:  |.|  
  Rat   847 ---DIIYTSPQIDRNI----------IQQYKLEALENEIKGKLLDIVHRDSSFGLSKEDKAFLWE 898

  Fly  1913 -KYFQEAIAVHRQSESCHVQMAQFLEKILEARQGGKSEPTGEQDDMLINVMVNYAKSLRYGSEHV 1976
             :|:            | ::....|.|||.:....|              ..|.||:  |...|.
  Rat   899 KRYY------------C-LKHPNCLPKILASAPNWK--------------WANLAKT--YSLLHQ 934

  Fly  1977 YQSMPRLISLWLDTTESSTNTEQVKKM---------NDLLTNCCTALPTAVFYTVYSQ------M 2026
            :..:..|.:  |:..::....::|:.:         :|.||:.......|:.|.:|..      :
  Rat   935 WPPLCPLAA--LELLDAKFADQEVRSLAVSWIEAISDDELTDLLPQFVQALKYEIYLNSSLVRFL 997

  Fly  2027 LSRLCHPVNDVFTVLRNVIIKLVEAYPQQSLWMLLPHFKSAKAHRIKRCKLVLTDSRLQNSTFQK 2091
            |||          .|.|:.|       ..||:.||              |..|.|:|. .|.::.
  Rat   998 LSR----------ALGNIQI-------AHSLYWLL--------------KDALHDTRF-GSRYEH 1030

  Fly  2092 LLQDFNSLTERLMDLTNKEV--TLDRTYKLSDLDTRLSKLCKQPEFSQILLPFEKYMQPT----- 2149
            :|       ..|:.:..|.:  .|.:..||..|...:::..:|...|...:..:|.|:..     
  Rat  1031 VL-------GALLSVGGKGLREELSKQMKLVQLLGGVAEKVRQASGSARQVVLQKSMERVQSFFL 1088

  Fly  2150 -----LPLNSDSNSSEGSHLPANQSTVNWFPYQQIYISGFQESVLILRSAAKPKKLTIRCSD--G 2207
                 :||...        |.|.:..:              :|.....|.|.|.|:|:..:|  |
  Rat  1089 RNKCRVPLKPS--------LVAKELNI--------------KSCSFFSSNAMPLKVTMVNADPLG 1131

  Fly  2208 KDYDVLVKPKDDLRRDARLMEFNGLV-KRYLHQDAPARQRRLHIRTYAVLPFNEECGLVEWLPNL 2271
            ::.:|:.|..:|||:|...::...:: |.:|.:...     |.:..:..|....:.|:||.:|..
  Rat  1132 EEINVMFKVGEDLRQDMLALQMIKIMDKIWLKEGLD-----LRMVIFKCLSTGRDQGMVELVPAS 1191

  Fly  2272 ASYRSICMNLYAQRRLVMSTRQLQSLAVPLHESIERKREVFTKQLVPAHPPVFQEWLRQRFATPH 2336
            .:.|.|.:. |.    |..:.:.:.||                           ||||:...:..
  Rat  1192 DTLRKIQVE-YG----VTGSFKDKPLA---------------------------EWLRKYNPSEE 1224

  Fly  2337 SWYEARNTYIRTVAVMSMVGYILGLGDRHGENILFAEGNGDAVHVDFNCLFNQGELLPYPEV--- 2398
            .:.:|...:|.:.|...:..|:||:.|||.:||:. ...|...|:||      |:.|.:.::   
  Rat  1225 EYEKASENFIYSCAGCCVATYVLGICDRHNDNIML-RSTGHMFHIDF------GKFLGHAQMFGS 1282

  Fly  2399 -----VPFRLTHNMIVAMGPLGVEGSFR------KCCEITLRLLKQESK---TLMSILRPFVYDV 2449
                 .||.||.:|...:.. |.:.:.|      .||: ...|:::::.   .|:|::.|     
  Rat  1283 FKRDRAPFVLTSDMAYVING-GEKPTIRFQLFVDLCCQ-AYNLIRKQTNLFLNLLSLMIP----- 1340

  Fly  2450 GAQTRKGAATAKITKDVQRIADRLQGHVKRQQANSIPLSTEGQVNFLINE---------ATK--- 2502
                 .|.......:|::.:.|.||           |.:|:.:.......         |||   
  Rat  1341 -----SGLPELTSIQDLKYVRDALQ-----------PQTTDAEATIFFTRLIESSLGSIATKFNF 1389

  Fly  2503 -VDNLASM 2509
             :.|||.:
  Rat  1390 FIHNLAQL 1397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-41NP_523369.2 UME 955..1060 CDD:214825
FAT 1653..1985 CDD:280429 64/408 (16%)
PIKKc_ATR 2181..2448 CDD:270625 62/286 (22%)
FATC 2486..2517 CDD:280430 8/37 (22%)
Pik3c2aNP_001101970.1 PI3K_rbd 411..514 CDD:279173 3/6 (50%)
C2A_PI3K_class_II 678..850 CDD:175979 30/208 (14%)
PI3Ka_II 871..1039 CDD:238441 46/237 (19%)
PI3Kc_C2_alpha 1044..1396 CDD:270720 86/440 (20%)
PX_PI3K_C2_alpha 1427..1535 CDD:132822
C2B_PI3K_class_II 1561..1682 CDD:176027
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.