DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mei-41 and Sh3pxd2b

DIOPT Version :9

Sequence 1:NP_523369.2 Gene:mei-41 / 32608 FlyBaseID:FBgn0004367 Length:2517 Species:Drosophila melanogaster
Sequence 2:XP_006514775.1 Gene:Sh3pxd2b / 268396 MGIID:2442062 Length:936 Species:Mus musculus


Alignment Length:632 Identity:121/632 - (19%)
Similarity:206/632 - (32%) Gaps:202/632 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1093 FLDRMENVSPSIQKCIRRHTAHLDLK-----GLAEEENQSPPLVDQLRFLQKHITDECLQVRVYA 1152
            ::.|:...|.:.:...||::...||:     ....|..|..|....:.||...|        ::.
Mouse    27 YIIRVTWSSGATEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKI--------LFR 83

  Fly  1153 LQHLGDLFGRRRPKLNSTILSELPLEPMLEQIVNVLMAGCQHDDSQLQMASAKCLGELGAIDASY 1217
            ..|:.|:..:|...::....:.:.|.|.:.|        |   |..||....:            
Mouse    84 RSHIRDVAVKRLIPIDEYCKALIQLPPYISQ--------C---DEVLQFFETR------------ 125

  Fly  1218 LPSNYNFASPQHL--------PLNILSDDFAVLALTSLCRGYQFQQNTKHVDSFSLAIQETLAIC 1274
             |.:.|....:|:        |.::   |..||....:...||.|::::    .||::.:.:.|.
Mouse   126 -PEDLNPPKEEHIGKKKSGNDPTSV---DPMVLEQYVVVADYQKQESSE----ISLSVGQVVDII 182

  Fly  1275 GISPKEQKKVQLWQSLPARMRQLMEPMLHSCYTCVHRPSTCLQ-----------QPLFGSHYSHN 1328
                 |:.:...|....|..:..:             |:|||:           ||         
Mouse   183 -----EKNESGWWFVSTAEEQGWV-------------PATCLEGQDGVQDEFSLQP--------- 220

  Fly  1329 YYEEWAFLWASRLIDYLPSS-GRRHLLSSYKPCIKRDSNMLSTFYPYILLHALLECTTEQRNHIQ 1392
              ||.::.:.|     ||.| |||..|........|.....:..|||         |...::.:.
Mouse   221 --EEVSWRYCS-----LPRSVGRRRTLGDLYAISWRQEEKYTVIYPY---------TARDQDEMN 269

  Fly  1393 EE---FMAVLQANEESSSSVRGRQELGAIKENAFKQFESRKYAAGIKPLA--------------- 1439
            .|   .:.|:|.|.|....:|.:.:.|....:..|:.........:.|.:               
Mouse   270 LERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKLGPSSPAHSGALDLDGVSRH 334

  Fly  1440 STLVSDRKE--DSSRVPRLAGKLCAELLDFLQRWLREWQRIHGRSTGGKP----------PETID 1492
            ...:...||  ::.|..|..|:|..: .|..||..:..||...|.....|          |..::
Mouse   335 QNAMGREKELLNNQRDGRFEGRLVPD-GDVKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVE 398

  Fly  1493 SNYRKIHEFLNLIPKLLVSRASYNCGEYARALS---YLESYLEEG------EDKSQR-------- 1540
            ..|..|.||...||..:..:|........::||   |::...:||      .||.::        
Mouse   399 EEYYTIAEFQTTIPDGISFQAGLKVEVIEKSLSGWWYIQMEDKEGWAPATFIDKYKKTSSASRPN 463

  Fly  1541 ----LLEQFTFL-------------VEVYGSLRD-PDSVEGAV-----------------QVRSY 1570
                |..:.|.|             .|..|..|. |::..|||                 :..|.
Mouse   464 FLAPLPHEMTQLRLGDAAATENNTGPEAVGPSRPLPEAPHGAVDSGMLWSKDWKGGKEAPRKASS 528

  Fly  1571 DMSV----------TQDILVNRLVERQQDMITSYEQLLSSTDQ-MQP 1606
            |:|.          ||:...: |..|::.:|.|.|:||....| |:|
Mouse   529 DLSASTGYEEISDPTQEEKPS-LPPRKESIIKSEEELLERERQKMEP 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-41NP_523369.2 UME 955..1060 CDD:214825
FAT 1653..1985 CDD:280429
PIKKc_ATR 2181..2448 CDD:270625
FATC 2486..2517 CDD:280430
Sh3pxd2bXP_006514775.1 PX_FISH 7..125 CDD:132798 22/116 (19%)
SH3_Tks4_1 155..209 CDD:213008 13/75 (17%)
SH3_Tks4_2 252..305 CDD:213009 11/61 (18%)
SH3_Tks4_3 400..452 CDD:213011 12/51 (24%)
SH3_Tks4_4 879..934 CDD:212951
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.