DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4239 and tric-1B.2

DIOPT Version :10

Sequence 1:NP_573122.1 Gene:CG4239 / 32606 FlyBaseID:FBgn0030745 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_496606.2 Gene:tric-1B.2 / 190342 WormBaseID:WBGene00013268 Length:313 Species:Caenorhabditis elegans


Alignment Length:272 Identity:126/272 - (46%)
Similarity:190/272 - (69%) Gaps:6/272 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPEAFLDVANQVIKLKMFPFFDIAHSLLAALAVREDLGANAQAFSRKHPLACWLSTMLVIFAGG 65
            :|.:..:|....|.|||::|:||.||.:|..|:||.|||.:|.:||||||.:||||.||:.|||.
 Worm    10 IDHDTLIDAGGYVQKLKLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCMLMSFAGS 74

  Fly    66 MVANGLLGEPILAPLKNTGQLLVGTAVWYVVFYTPFDIGYKVAKFLPVKIVASAMKEIYRAKKVY 130
            .::..||||||::|||....:|:|:.|||:|||:|||:.:::|.:.|||:..|.:||:.|..|:.
 Worm    75 FLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIA 139

  Fly   131 DGVGHAAKLYPNAWIIMIIIGTLKGNGAGFTKLIERLIRGAWTPTAMEFMQPSFYTKASLLASII 195
            .||.||.::||.::::.|::|..||.|:|..|::|:|.||.|.||..|.::|||.|||.::|||:
 Worm   140 AGVKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPTNHEILRPSFTTKACVIASIV 204

  Fly   196 FVLDKKTDWISAPHALVYFGIVIFLVYFKLSSILLGIHDPFLPLENLCCAIFFGGIWDSLAKILG 260
            |.|::.:.:::|||.|||..:|.|.:||||:|:.|.:||..:|:||:.||:|.|||.|:.||   
 Worm   205 FTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPIENVLCAVFMGGIIDAFAK--- 266

  Fly   261 RGQAKDGDSKDV 272
               |.|...|.:
 Worm   267 ---AVDATKKAI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4239NP_573122.1 TRIC 42..226 CDD:461583 88/183 (48%)
tric-1B.2NP_496606.2 TRIC 51..235 CDD:461583 88/183 (48%)

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