DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonA and raver1

DIOPT Version :10

Sequence 1:NP_727962.1 Gene:nonA / 32603 FlyBaseID:FBgn0004227 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_021326440.1 Gene:raver1 / 553693 ZFINID:ZDB-GENE-050522-99 Length:749 Species:Danio rerio


Alignment Length:153 Identity:40/153 - (26%)
Similarity:69/153 - (45%) Gaps:13/153 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 LEPVEVP-----TETKFSGRNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDY 346
            |.|.|:.     |..:|..|.::.:.||..||::.|:.|:...| ::...|.:..|...|:.:..
Zfish    72 LSPEEIASRLERTRREFYNRRKIIIKNLPADISNQEVHELLGNY-DLKYCFVDKYKGTAFVTLLN 135

  Fly   347 HPNAEKAKRALDGSMRKGRQLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFGPIERA----SI 407
            ...|:.|.:.....:.:.|::.|:..|...:|.::||....:.:...:....||.|||.    |.
Zfish   136 GEQAQFAIKEFHQYVLRDREISVQLQPTDALLCIANLPRAFTQQQFEELVRPFGNIERCFLVHSA 200

  Fly   408 TVDDRGKHMGEGIVEFAKKSSAS 430
            |.   |...|.|.||:.||.||:
Zfish   201 TT---GHSKGYGFVEYMKKDSAA 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonANP_727962.1 RRM1_p54nrb_like 301..371 CDD:409769 15/69 (22%)
RRM2_p54nrb_like 377..456 CDD:409770 19/58 (33%)
NOPS_NONA_like 447..546 CDD:240580
DUF5401 <499..>618 CDD:375164
PTZ00121 <508..730 CDD:173412
raver1XP_021326440.1 RRM1_RAVER1 92..162 CDD:410064 14/70 (20%)
RRM2_RAVER1 166..242 CDD:410066 19/58 (33%)
RRM3_RAVER1 252..343 CDD:410068
Blue background indicates that the domain is not in the aligned region.

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