DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment nonA and Rbm4b

DIOPT Version :9

Sequence 1:	NP_727962.1	Gene:	nonA / 32603	FlyBaseID:	FBgn0004227	Length:	742	Species:	Drosophila melanogaster
Sequence 2:	NP_001007015.2	Gene:	Rbm4b / 474154	RGDID:	1359343	Length:	357	Species:	Rattus norvegicus

Alignment Length:	126	Identity:	40/126 - (31%)
Similarity:	65/126 - (51%)	Gaps:	8/126 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   303 RLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAKRALDGSMRKGRQL 367
            :|::|||..:.|:.|:|.:|:.||::.|  .::.||:.|:.::....||.|.|.|......|..:
  Rat     3 KLFIGNLPREATEQEIRSLFEQYGKVLE--CDIIKNYGFVHIEDKTAAEDAIRNLHHYKLHGVNI 65

  Fly   368 RVRFAPN----ATILRVSNLTPFVSNELLYKSFEIFGPIERASITVDDRGKHM--GEGIVE 422
            .|..:.|    :|.|.|.|::|..:|:.|...||.:||:....|..|....||  .|..||
  Rat    66 NVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVE 126

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nonA	NP_727962.1	RRM1_p54nrb_like	301..371	CDD:240778	21/67 (31%)
		RRM2_p54nrb_like	377..456	CDD:240779	17/48 (35%)
		NOPS_NONA_like	447..546	CDD:240580
		GBP_C	<508..613	CDD:303769
		coiled coil	584..595	CDD:293879
		coiled coil	603..613	CDD:293879
Rbm4b	NP_001007015.2	RRM1_RBM4	2..68	CDD:241050	20/66 (30%)
		RRM2_RBM4	78..144	CDD:241051	18/49 (37%)
		ZnF_C2HC	161..176	CDD:197667
		Interaction with TNPO3. /evidence=ECO:0000250	196..357
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000