DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nonA and nonA-l

DIOPT Version :9

Sequence 1:NP_727962.1 Gene:nonA / 32603 FlyBaseID:FBgn0004227 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001262646.1 Gene:nonA-l / 42026 FlyBaseID:FBgn0015520 Length:630 Species:Drosophila melanogaster


Alignment Length:676 Identity:419/676 - (61%)
Similarity:478/676 - (70%) Gaps:74/676 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESAGKQDNNATQQLPQRQQRGNQQANKNLGKHNAQKQNDSADGGPAEKKQRFGGPNAQNQNQNQ 65
            ||.|.|:::..:..||||||||| ..||||||....|.|.::||.|||||.|.|| |.||     
  Fly     1 MEGAVKKNSLNSSPLPQRQQRGN-STNKNLGKPTPPKLNAASDGNPAEKKARLGG-NTQN----- 58

  Fly    66 NQNGGVTGGGGAVGGPNQNKNFGNNKGGFVGNRNRNNNRAGNQNRT---FPGNNNPNQKPNNETS 127
              .|||.||||..||...    |...||...:|||  ||.||||..   |...||.:||..||:.
  Fly    59 --GGGVAGGGGTGGGGGG----GGATGGVEFSRNR--NRGGNQNENRQGFQVANNSHQKQINESP 115

  Fly   128 KADGPNALAKNNEPATAAAGQNQANQNANKGQNQRQGQNQNQNQVHGQGNQGGPGNQG----GAG 188
            |....|..|||||.:....||||.| ::||||.             .||:||..||||    |.|
  Fly   116 KPAAGNVPAKNNELSAGGGGQNQPN-HSNKGQG-------------NQGDQGEQGNQGPNFRGRG 166

  Fly   189 NQGGQGNQGGAGNQGNGQGFRGRNAGNNQGG----GFSGGPQNQQRDNRNRSGPRPGGGAGGAMN 249
            ....|.||.  .||....|:.| |.|:|:||    |..||  ..||.||:|   |.||  .|.||
  Fly   167 GGPNQPNQN--ANQEQSNGYPG-NQGDNKGGQGQRGAGGG--KHQRGNRSR---RSGG--SGIMN 221

  Fly   250 STNMGGGGGGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDIT 314
            | :|||||        :.||||||.|||..|||||.||.|:|:||:.||.|||||||||||:|.|
  Fly   222 S-SMGGGG--------QRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTT 277

  Fly   315 DDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAKRALDGSMRKGRQLRVRFAPNATILR 379
            ||:|||||||||||.:||||.:||||||::||:.||||||||||||:||||.||||||||| |:|
  Fly   278 DDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNA-IVR 341

  Fly   380 VSNLTPFVSNELLYKSFEIFGPIERASITVDDRGKHMGEGIVEFAKKSSASACLRMCNEKCFFLT 444
            |:||..|||||||::|||||||||||.|.|||||||.||||||||||||||||||:|||||||||
  Fly   342 VTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLT 406

  Fly   445 ASLRPCLVDPMEVNDDTDGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSRWKQLHNLFKT 509
            ||||||||:|||||:|.||||:|..|||..:|..|||:|||||..|||||||||||||||:|||:
  Fly   407 ASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKS 471

  Fly   510 KQDALKRELKMEEDKLEAQMEYARYEQETELLRQELRKREVDNERKKLEWEMREKQAEEMRKREE 574
            |||:||||||||||||||||||||||||||||||||:|||:||||.|||||||||||||:|||||
  Fly   472 KQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREE 536

  Fly   575 ETMRRHQTEMQSHMNRQEEDMLRRQQET-LFMKAQQLNSLLDQQEGFGGGGGGNNSTFDNFAGNS 638
            |.|.|:|.::..|    ||||..||||. |.|:|::||.:|||||||    ||:||.|::|    
  Fly   537 EYMHRYQNQLLRH----EEDMRARQQENDLLMQAKKLNMILDQQEGF----GGSNSGFEHF---- 589

  Fly   639 NSPFEVFRGNNNNNSTMIGNNAAPNT 664
            :|||||| |||:|||||.|.....|:
  Fly   590 DSPFEVF-GNNSNNSTMAGPGGPDNS 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonANP_727962.1 RRM1_p54nrb_like 301..371 CDD:240778 56/69 (81%)
RRM2_p54nrb_like 377..456 CDD:240779 67/78 (86%)
NOPS_NONA_like 447..546 CDD:240580 81/98 (83%)
GBP_C <508..613 CDD:303769 79/105 (75%)
coiled coil 584..595 CDD:293879 3/10 (30%)
coiled coil 603..613 CDD:293879 5/9 (56%)
nonA-lNP_001262646.1 RRM1_p54nrb_like 264..334 CDD:240778 56/69 (81%)
RRM2_p54nrb_like 339..418 CDD:240779 67/78 (86%)
NOPS_NONA_like 409..508 CDD:240580 81/98 (83%)
OmpH <479..578 CDD:281871 76/102 (75%)
DUF4472 479..559 CDD:291409 65/83 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449510
Domainoid 1 1.000 77 1.000 Domainoid score I8758
eggNOG 1 0.900 - - E1_KOG0115
Homologene 1 1.000 - - H134177
Inparanoid 1 1.050 263 1.000 Inparanoid score I3072
Isobase 1 0.950 - 0 Normalized mean entropy S2409
OMA 1 1.010 - - QHG26191
OrthoDB 1 1.010 - - D1274880at2759
OrthoFinder 1 1.000 - - FOG0001632
OrthoInspector 1 1.000 - - mtm6571
orthoMCL 1 0.900 - - OOG6_107408
Panther 1 1.100 - - P PTHR23189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4077
SonicParanoid 1 1.000 - - X1036
1514.790

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