DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nonA and nono

DIOPT Version :9

Sequence 1:NP_727962.1 Gene:nonA / 32603 FlyBaseID:FBgn0004227 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_991398.1 Gene:nono / 403096 XenbaseID:XB-GENE-1002494 Length:465 Species:Xenopus tropicalis


Alignment Length:430 Identity:161/430 - (37%)
Similarity:235/430 - (54%) Gaps:47/430 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 GPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDY 346
            |.|.:|:....|.|..::.|:||:||||..|:|::|:|::|:.||:..|||.:.||.|.|::::.
 Frog    49 GVTIDLKNFRKPGEKTYTQRSRLFVGNLPMDVTEEEMRKLFEKYGKAGEIFIHKDKGFGFIRLET 113

  Fly   347 HPNAEKAKRALDGSMRKGRQLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFGPIERASITVDD 411
            ...||.||..||....:|:|||||||.::..|.|.|:..|||||||.::|.|||.:||..:.|||
 Frog   114 RTLAEIAKAELDNLPLRGKQLRVRFACHSASLSVKNIPQFVSNELLEEAFSIFGQVERTVVIVDD 178

  Fly   412 RGKHMGEGIVEFAKKSSASACLRMCNEKCFFLTASLRPCLVDPMEVNDDTDGLPEKAFNKKMPDF 476
            ||:..|:||||||.|.||...|..|::..:.||:..||..|:||:..||.:|||||...|     
 Frog   179 RGRSTGKGIVEFASKPSARKALDRCSDGAYLLTSFPRPITVEPMDQLDDEEGLPEKLLVK----- 238

  Fly   477 NQ----ERSIGPRFADPNSFEHEYGSRWKQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQE 537
            ||    ||...||||.|.|||:||..|||.|..:.|.:|:.:.|.:|..::|:|.:||.||:|.:
 Frog   239 NQMCQREREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQEQVDRNIKEAQEKMEIEMEAARHEHQ 303

  Fly   538 TELLRQELRKREVDNER----------KKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQE 592
            ..|:||:|.:|:.:..|          |:.:.|:|.:  ||.|:|||||            .||:
 Frog   304 VMLMRQDLMRRQEELRRMEELHSQEVQKRKQIELRHE--EERRRREEET------------RRQQ 354

  Fly   593 EDMLRRQQE---TLFMKAQQLNSLLDQQEGFGGGGGGNNSTFDNFAGNSNSPFEVFRGNNNNNST 654
            |:|||||||   ..:..|::.:..:.|....|..|..|..:..|....|.:......|.....:.
 Frog   355 EEMLRRQQEGFKNSYPDAREADIRMAQMAMPGAIGMNNRPSLANSNVASGAAANAGPGAMMPEAA 419

  Fly   655 MIGNNAAPNTQ-----EIKRLDG------PINEITSNFSP 683
            .||..:.|..:     .|:.|.|      |.....::|.|
 Frog   420 AIGMTSPPTERFGQAPNIEGLGGANPPAFPRGTPGADFGP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonANP_727962.1 RRM1_p54nrb_like 301..371 CDD:240778 32/69 (46%)
RRM2_p54nrb_like 377..456 CDD:240779 39/78 (50%)
NOPS_NONA_like 447..546 CDD:240580 45/102 (44%)
GBP_C <508..613 CDD:303769 39/117 (33%)
coiled coil 584..595 CDD:293879 3/10 (30%)
coiled coil 603..613 CDD:293879 1/9 (11%)
nonoNP_991398.1 RRM1_p54nrb 68..138 CDD:241032 32/69 (46%)
RRM_SF 144..223 CDD:388407 39/78 (50%)
NOPS_p54nrb 214..307 CDD:240582 42/97 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I8956
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I2885
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274880at2759
OrthoFinder 1 1.000 - - FOG0001632
OrthoInspector 1 1.000 - - mtm9442
Panther 1 1.100 - - O PTHR23189
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1036
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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