Sequence 1: | NP_727962.1 | Gene: | nonA / 32603 | FlyBaseID: | FBgn0004227 | Length: | 742 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_741283.1 | Gene: | grld-1 / 176827 | WormBaseID: | WBGene00017929 | Length: | 520 | Species: | Caenorhabditis elegans |
Alignment Length: | 316 | Identity: | 71/316 - (22%) |
---|---|---|---|
Similarity: | 115/316 - (36%) | Gaps: | 78/316 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 259 GGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKF-----SGRNRLYVGNLTNDITDDEL 318
Fly 319 REMFKPYGEISEIF----SNLDKNFTFLKVDYHPNAEKAK-RALDGSMRK-GRQLRVRFAPNATI 377
Fly 378 LR--VSNLTPFVSNELLYKSFEIFGPIERASITVD-DRGKHMGEGIVEFAKKSSASACLRMCNEK 439
Fly 440 CFFLTASLRPCLVDPMEVNDDTDGLPEK-AFNKKMPDFNQERSIGPRFAD-----PNS------- 491
Fly 492 ---FEHEYGSRWKQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQETELLRQE 544 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nonA | NP_727962.1 | RRM1_p54nrb_like | 301..371 | CDD:240778 | 19/75 (25%) |
RRM2_p54nrb_like | 377..456 | CDD:240779 | 22/81 (27%) | ||
NOPS_NONA_like | 447..546 | CDD:240580 | 25/114 (22%) | ||
GBP_C | <508..613 | CDD:303769 | 8/37 (22%) | ||
coiled coil | 584..595 | CDD:293879 | |||
coiled coil | 603..613 | CDD:293879 | |||
grld-1 | NP_741283.1 | RRM_SF | 33..>93 | CDD:302621 | |
RRM_SF | 167..246 | CDD:302621 | 19/78 (24%) | ||
RRM3_Spen | 253..324 | CDD:240756 | 21/78 (27%) | ||
SPOC | 376..482 | CDD:285043 | 9/45 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |