Protein Alignment nonA and rsp-3

DIOPT Version :9

• Sequence 1: NP_727962.1
• Gene: nonA / 32603
• FlyBaseID: FBgn0004227
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: NP_001370111.1
• Gene: rsp-3 / 176688
• WormBaseID: WBGene00004700
• Length: 258
• Species: Caenorhabditis elegans
• Alignment Length: 352
• Identity: 67/352 - (19%)
• Similarity: 105/352 - (29%)
• Gaps: 157/352 - (44%)

  Fly   303 RLYVGNLTNDITDDELREMFKPYGEIS--EIFSNLDKNFTFLKVDYHPNAEKAKRALDGSMRKGR 365
            ::|||||..|:.:.|:.::|..||.|.  :|.|.....|.|::.:.|.:||.|.||.||....||
 Worm    10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGR 74

  Fly   366 QLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFGPIERASITVDDRGKHMGEGIVEFAKKSSAS 430
            ::||.|....                        ||.......:.|.|.|.|
 Worm    75 RIRVEFTRGV------------------------GPRGPGGRPLQDGGDHRG------------- 102

  Fly   431 ACLRMCNEKCFFLTASLRPCLVDPMEVNDDTDGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHE 495
                                                       .||...|. |.|...|   :..
 Worm   103 -------------------------------------------GDFRGGRG-GGRGGGP---QRR 120

  Fly   496 YGSR-----------WKQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQETELLRQELRKRE 549
            .|.|           |:.|.:..:...|....::..:...:   :|:.|||             :
 Worm   121 TGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGTGV---VEFTRYE-------------D 169

  Fly   550 VDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQEEDMLRRQQETLFMKAQQLNSLL 614
            |....:||:                      .|:.:||           :.||.:::.::
 Worm   170 VKYAVRKLD----------------------DTKFRSH-----------EGETAYIRVRE----- 196

  Fly   615 DQQEGFGGGGGGNNSTFDNFAGNSNSP 641
            |...|.|.||||.:.:      .|.||
 Worm   197 DNSSGGGSGGGGRDRS------RSRSP 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nonA	NP_727962.1	RRM1_p54nrb_like	301..371	CDD:240778	27/69 (39%)
		RRM2_p54nrb_like	377..456	CDD:240779	6/78 (8%)
		NOPS_NONA_like	447..546	CDD:240580	15/109 (14%)
		GBP_C	<508..613	CDD:303769	13/104 (13%)
		coiled coil	584..595	CDD:293879	2/10 (20%)
		coiled coil	603..613	CDD:293879	0/9 (0%)
rsp-3	NP_001370111.1	RRM1_SRSF1_like	10..80	CDD:409775	27/69 (39%)
		RRM2_SRSF1_like	123..196	CDD:410013	16/121 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000