Protein Alignment nonA and pspc1

DIOPT Version :10

• Sequence 1: NP_727962.1
• Gene: nonA / 32603
• FlyBaseID: FBgn0004227
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: XP_002938004.2
• Gene: pspc1 / 100489975
• XenbaseID: XB-GENE-492866
• Length: 517
• Species: Xenopus tropicalis
• Alignment Length: 471
• Identity: 173/471 - (36%)
• Similarity: 263/471 - (55%)
• Gaps: 42/471 - (8%)

  Fly   252 NMGGGG----GGGGGGGPRG-----GEDFFITQRL---RSISGPTFELEPVEVPTETKFSGRNRL 304
            |.||||    ...|.|..|.     |:...:..::   ....|.|.:::....|.|..::.|.||
 Frog    14 NNGGGGEMLSPPSGKGSKRSFEVAEGDPSLMPPKMEDGEEERGVTIDIKSFLKPGEKSYTQRCRL 78

  Fly   305 YVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAKRALDGSMRKGRQLRV 369
            :||||..|||::|.:::|:.:||.||:|.|.|:.|.|::::....||.||..|||.:.|.|.||:
 Frog    79 FVGNLPTDITEEEFKKLFEKFGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGMILKNRPLRI 143

  Fly   370 RFAPNATILRVSNLTPFVSNELLYKSFEIFGPIERASITVDDRGKHMGEGIVEFAKKSSASACLR 434
            |||.:...|.|.||.|.||||||.::|.:|||:|||.:.|||||:..|:|.||||.|.:|...|.
 Frog   144 RFATHGAALTVKNLAPVVSNELLEEAFSMFGPVERAVVIVDDRGRPTGKGFVEFAAKPAARKALE 208

  Fly   435 MCNEKCFFLTASLRPCLVDPMEVNDDTDGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSR 499
            .|.|..|.||.:.||.:|:|||..||.|||||| |.:|...:.:||...||||.|.:||.||.||
 Frog   209 RCTEGAFILTTTPRPVIVEPMEQFDDEDGLPEK-FMQKTQQYLKEREEPPRFAQPGTFEFEYSSR 272

  Fly   500 WKQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQETELLRQELRKREVDNERKKLEWEMREK 564
            ||.|..:.|.::|.:.|.::..::||||:||.||:|.:..|:||:|.:|:  .|.::|| |:|.:
 Frog   273 WKALDEMEKQQRDQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQ--EELRRLE-ELRNQ 334

  Fly   565 QAEEMRK---REEETMRRHQTEMQSHMNRQEEDMLRRQQ--ETLFMKAQQLNSLLDQQEGFGGGG 624
            :.::.::   |.||..||.:.|:   |.::::|.||||:  :|.:|..::    .|.:.|..|..
 Frog   335 ELQKRKQFQMRHEEEQRRREEEL---MRQRDQDDLRRQEGFKTNYMDTRE----QDMRMGDMGVR 392

  Fly   625 GGNN--STFDNFAGNSNSPFEVFRGNNNNNSTM----IGNNAAPNTQEIKRLDGPI--------N 675
            |..|  .|:......:..|..:...|.||.:|:    :|.:|....:....|..|:        |
 Frog   393 GAINMGDTYSPATAGTQGPPPMMGMNMNNRATVPGPTMGPSATMGAEGTTSLGAPMIPDNGSVRN 457

  Fly   676 EITSNFSPPDLDSDII 691
            :..|..||..:.|.::
 Frog   458 DRFSQASPSQMGSPMV 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nonA	NP_727962.1	RRM1_p54nrb_like	301..371	CDD:409769	32/69 (46%)
		RRM2_p54nrb_like	377..456	CDD:409770	41/78 (53%)
		NOPS_NONA_like	447..546	CDD:240580	47/98 (48%)
		DUF5401	<499..>618	CDD:375164	41/123 (33%)
		PTZ00121	<508..730	CDD:173412	56/203 (28%)
pspc1	XP_002938004.2	RRM1_PSP1	75..145	CDD:409999	32/69 (46%)
		RRM2_PSP1	151..230	CDD:410002	41/78 (53%)
		NOPS_PSPC1	221..314	CDD:240584	44/93 (47%)