DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sl and PLC8

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_001327564.1 Gene:PLC8 / 823882 AraportID:AT3G47290 Length:573 Species:Arabidopsis thaliana


Alignment Length:985 Identity:163/985 - (16%)
Similarity:249/985 - (25%) Gaps:520/985 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 YSEDQ-QVVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLF 308
            |.:|. :.:|  .|.:.|..|:.:..|...::..||:.:.....|:....:...|...:..:|||
plant    29 YGDDMPETLR--RLTELLGYEKEEDGAGMNAAKKIAAELNRRKDDIPAFRRLRCLELDQLNEFLF 91

  Fly   309 S-KQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDC 372
            | |.|....   |||..||:.|||.|:|.:|.|:|.||:.| .:.|......||..|.|.:|||.
plant    92 STKLNPPIG---DQVHHDMHAPLSHYFIHTSLNSYFTGNVF-GKYSILPIIEALEQGVRVVELDL 152

  Fly   373 WNGPDNLPYIF--HGHTITSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIE 435
            |  ||....|.  ........:|..:.:.:||:||||...||:|::.:.....|.|....|.:.:
plant   153 W--PDGRGSICVRPSWNFEKPLKLQECLDSIKEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQ 215

  Fly   436 VFGDMLLTQPCDRNEQH----LPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAG 496
            .|..|:.     .::.|    .|||.|||.||::..:                            
plant   216 TFNHMVY-----HHDPHSLEVFPSPQQLRNKILISRR---------------------------- 247

  Fly   497 GGAHGENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLS 561
                                                  ..:||:|                    
plant   248 --------------------------------------PPKELLY-------------------- 254

  Fly   562 SSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVG 626
                             |||:                              ||...||       
plant   255 -----------------ANDD------------------------------DGKVGVR------- 265

  Fly   627 DYSLSFWRRNRPNHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVP 691
                                  ||                                         
plant   266 ----------------------NG----------------------------------------- 267

  Fly   692 QPKKHEDQEWFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRL 756
                                      :||......|                             
plant   268 --------------------------VEIRQHPADP----------------------------- 277

  Fly   757 YGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGS 821
                  |::||||.                |.|..   |..|.....|                 
plant   278 ------NYQSLVSF----------------HVVEP---RGMLQNVLTG----------------- 300

  Fly   822 NLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTT 886
                          ||||              :||                              
plant   301 --------------KANK--------------IQR------------------------------ 307

  Fly   887 EDYNSLNEEGTDGRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIK 951
                                            ||                               
plant   308 --------------------------------PG------------------------------- 309

  Fly   952 AIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPFREHSWIFQEMSSFPETKAEKQFFQ 1016
                                                         |...::.||    .:|:|. 
plant   310 ---------------------------------------------WYETDIISF----TQKRFL- 324

  Fly  1017 QNTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQ 1081
                           |..|:.:.|..:.:.|...|..|:|:|||:.:...:.:.|.|..||.||.
plant   325 ---------------RTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGG 374

  Fly  1082 CGYILKPSFM----KSDSFNPN-NPLCDGLSEVKVSIR---LIAARHLFRGGKSNNPQIVV--EL 1136
            |||:.||.|:    .|..|.|. ||:...:.:||:.:.   ::..:.  |.|:.:.|.:.|  .:
plant   375 CGYVKKPDFLLNAGPSGVFYPTVNPVVVKILKVKIYMGDGWIVDFKK--RIGRLSKPDLYVRISI 437

  Fly  1137 IGASFDTGVKYRTKVNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTC 1201
            .|...|..: .:|.|..|.:.|.|.|...|.:..|..|::.|||.|.::.....|..|.|.|::.
plant   438 AGVPHDENI-MKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSE 501

  Fly  1202 IRQGYRSVIL 1211
            :.:|.|:|.|
plant   502 LIEGIRAVPL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168
PI-PLCc_gamma 323..>470 CDD:176534 49/152 (32%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 6/97 (6%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 10/99 (10%)
SH3_PLCgamma 828..880 CDD:212759 6/51 (12%)
PLCYc 981..1091 CDD:128454 26/109 (24%)
C2_PLC_like 1109..1215 CDD:175974 29/108 (27%)
PLC8NP_001327564.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2940
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I1114
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2757
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X101
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.830

Return to query results.
Submit another query.