DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and plch1

DIOPT Version :10

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_073786090.1 Gene:plch1 / 566479 ZFINID:ZDB-GENE-060503-398 Length:1795 Species:Danio rerio


Alignment Length:1260 Identity:299/1260 - (23%)
Similarity:491/1260 - (38%) Gaps:462/1260 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLL-WATVATQTPRTDYEGAIQLREIREI 78
            :|:.:.:::.||.:.||  |........|..:.|.|..: |     :..|...:..|.:..:.::
Zfish    57 VERCMSVMQSGTQMVKL--KTGSKGLVRLFYLDEHRSCIRW-----RPSRKSEKAKITIDSLYKV 114

  Fly    79 RVGKHSKEFRLFADDCQRFESSKCFVILHGNHFKLKSFSVVALSEIEADNWVRGLRYMV-----K 138
            ..|:.|..|...|:.  .|:.|.||.|.||||  ::|..:|..:..||..||.||||::     :
Zfish   115 TEGRQSDIFHRHAEG--SFDPSCCFTIYHGNH--MESLDLVTSNSEEARTWVTGLRYLMAGISDE 175

  Fly   139 DTLGAPYPLQIDRWLRR----------------EYYQI---ENVNTHSAKATEQSPAQVTIKDFK 184
            |:| |......|:|:::                |.||:   .|||....|..:.           
Zfish   176 DSL-AKRQRTHDQWMKQTFEEADKNGDGLLNMEEIYQLLHKMNVNLPRRKVKQM----------- 228

  Fly   185 LFLAGVSCKMTTGKFMEHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQ 249
                          |.|..|:|  ::..|.|::|:..|:.:.|......:|       ..:|:.:
Zfish   229 --------------FQEADTDD--QQGTLTFEEFTVFYKMMSLRRDLFLLL-------MCFSDKK 270

  Fly   250 QVVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDL 314
            ..:...||..||..||:   .|.::.......|..| :..|.:.|...|....|.:::.|...|:
Zfish   271 DHLTAEELGNFLRVEQK---MSSVTPECCLDIINKF-EVSEENKQNGVLGIEGFTNYMRSPACDV 331

  Fly   315 WNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNL 379
            :|.::.::..||:.|:.:|:|||||||||||||..|.|..:.||..|:.||||:|:|||:|||..
Zfish   332 FNPQHHEINQDMDQPICNYFIASSHNTYLTGDQLLSHSKTDMYAWVLQAGCRCVEVDCWDGPDGE 396

  Fly   380 PYIFHGHTITSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDML-LT 443
            |.:.||:|:||||.|..||:||..:||.::|:|||||||.:||::||:.:||.|.|:|||.| :.
Zfish   397 PMVQHGYTLTSKITFKSVIETINKYAFVNNEFPVILSIENHCSIQQQKKIAQHLKEIFGDKLDVG 461

  Fly   444 QPCDRNEQHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENV 508
            :..:::.:.||||..|:.||:||.|:||.:      :|:                     |.|  
Zfish   462 EALNKDPKQLPSPNLLKGKILLKGKRLPSY------LSA---------------------DAE-- 497

  Fly   509 RKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQK 573
                 ||                            |:::..:.:..:|||.|.:|.|...:..|.
Zfish   498 -----EG----------------------------EVSDDDSADEIEDDFKLKNSTSNGPSQHQV 529

  Fly   574 QKDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRP 638
                    |.|.            ||:.|.|:|:.:               :||           
Zfish   530 --------ESHI------------RKKLDSLMKESQ---------------IGD----------- 548

  Fly   639 NHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFH 703
                   |.:..|              :|:     :.:||::               ||..:   
Zfish   549 -------KEDTDS--------------FSI-----RALLRAT---------------HEGLQ--- 569

  Fly   704 PNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLV 768
             ...::.::.|:.:.:..||:                  ..:||.|                   
Zfish   570 -RNLRKNSKDGMKKSQSRSFI------------------SNLKHKR------------------- 596

  Fly   769 SLINYYTRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALY 833
                                                 ||                :..:.|::: 
Zfish   597 -------------------------------------HS----------------KSRLKCQSV- 607

  Fly   834 SYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTD 898
                                                               .|||  ...:|.:.
Zfish   608 ---------------------------------------------------ETED--DSQQEPSG 619

  Fly   899 GRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQL 963
            |               :.|..|                                           
Zfish   620 G---------------QFNRGG------------------------------------------- 626

  Fly   964 ASERRKKERTARVAKEMSDLIIYFRSVPFREHSWIFQEMS-----SFPETKAEKQFFQQNTQLFL 1023
               ||:|  |.::::::|||:::..||..:|   ...|.|     ||.|.:|: .......:.||
Zfish   627 ---RRRK--TIKLSRDLSDLVVFTNSVASQE---CLDEGSPCNVLSFSEARAQ-NLVHHRAERFL 682

  Fly  1024 SYHRNQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKP 1088
            ::::.|:||:||...|:|||||||..:||||.|::||||||..:.||||:|||..||..||:|||
Zfish   683 TFNQRQLSRIYPSAYRIDSSNFNPQTYWNVGCQLVALNYQTEGRMMQLNRAKFMVNGGSGYVLKP 747

  Fly  1089 SFMKSDSFNP--NNPLCDGLSEVKVSIRLIAARHLFR--------GGKSNNPQIVVELIGASFDT 1143
            |.|...:|||  :.|| ....:.::.|::|:.:.|.:        .|:..:|.:.||:||...|.
Zfish   748 SLMSKGAFNPLSDEPL-PANPKKQLVIKIISGQQLPKPPDSMLGDRGEIIDPFVEVEIIGLPVDC 811

  Fly  1144 GVKYRTKVNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRS 1208
            ..:....|::|||||||.|:..|.:..|:.|::||.|.|.|.... .|:.|.....:.:..|||.
Zfish   812 CKEQTRVVDDNGFNPVWEETLSFTLHMPEVALVRFLVWDHDPIGR-DFVGQRTIAFSSLMPGYRH 875

  Fly  1209 VILRNKFSEELELSSLLINIKIANV 1233
            |.|     |.:..:|:.::|.:.::
Zfish   876 VYL-----EGMTEASIFVHITVHDI 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 37/130 (28%)
EFh_PI-PLCgamma 152..311 CDD:320031 33/177 (19%)
EF-hand motif 152..191 CDD:320031 8/57 (14%)
EF-hand motif 198..226 CDD:320031 8/27 (30%)
EF-hand motif 230..265 CDD:320031 6/34 (18%)
EF-hand motif 277..311 CDD:320031 7/33 (21%)
PI-PLCc_gamma 323..>470 CDD:176534 78/147 (53%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 13/97 (13%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 8/99 (8%)
SH3_PLCgamma 828..880 CDD:212759 1/51 (2%)
PLCYc 981..1091 CDD:128454 53/114 (46%)
C2_PLC_like 1109..1215 CDD:175974 34/113 (30%)
plch1XP_073786090.1 None

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