DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and plcd4a

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_694028.4 Gene:plcd4a / 565669 ZFINID:ZDB-GENE-050208-654 Length:761 Species:Danio rerio


Alignment Length:1230 Identity:264/1230 - (21%)
Similarity:420/1230 - (34%) Gaps:515/1230 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GTIVTKLYGKQRRPDRRHLMLIRETRQLLWATVATQTPRT-DYEGAIQLREIREIRVGKHSKEFR 88
            ||::.|:  |.|...::....::|....:|    .|:.:. :......:.::..:|.|..|:...
Zfish    27 GTVMRKI--KSRTWKKQRYFRLQEDCMTIW----YQSKKAGNAHSTFSVGDVEAVREGHQSEVLL 85

  Fly    89 LFADDCQRFESSKCFVIL----HGNHFKLKSFSVVALSEIEADNWVRGLRYMVKDTLGAPYPLQI 149
            ..||:   |...:||.::    .||      ..:||.|..||.:|::|:|.::.:........::
Zfish    86 SIADE---FPPDRCFTLVFRGRRGN------LDLVAESTKEAQSWIKGIRKLIDNLENMGQREKL 141

  Fly   150 DRWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFMEHFT-EDVRRKHDL 213
            |:|: .::::         ||.:....::..|:.:..|..::..|.....:..|| .|..:...|
Zfish   142 DQWI-CDWFK---------KADKNRDGRMNFKEVRDLLKMMNVDMNEHHALRLFTMADRSQSGTL 196

  Fly   214 KFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRPAELKQFLETEQRDVSASEISSAAI 278
            :.|:|...|:.|........|..       .||.|.|.:...:||.||:.||  :....:...|:
Zfish   197 EDDEFVLFYKMLTQREDILRVFQ-------EYSADGQKLTLKDLKDFLQEEQ--LHEDGVQQYAL 252

  Fly   279 ASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYL 343
            ....|....|..:.:|.  :||..|:.:|.|.:..::|....:::.||:.||..|:|:|||||||
Zfish   253 NLIERFEPSDTAKMLQA--MTFDGFLMYLSSSEGSIFNPAMLELYQDMSQPLCHYFISSSHNTYL 315

  Fly   344 TGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDVIKTIKDHAFTS 408
            ..||....||.|.|.|||:.||||:|:|||:||:..|.::||||.||||.|.||:..:.:::|.:
Zfish   316 LEDQIRGLSSVEGYIRALKRGCRCVEVDCWDGPNGEPIVYHGHTFTSKIFFKDVVTVLGNYSFKA 380

  Fly   409 SEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCD-RNEQHLPSPYQLRRKIILKHKKLPQ 472
            ||||||||||.:||:|||:.|||.|.::.||.||....| :....||||..|:.||:||.||:..
Zfish   381 SEYPVILSIENHCSVEQQKIMAQHLTQILGDKLLKSTLDGKIPLGLPSPEDLKGKILLKGKKIGG 445

  Fly   473 FDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQ 537
            .:|..||:                                      ..||               
Zfish   446 LEDGMNGV--------------------------------------VDDP--------------- 457

  Fly   538 ELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKEAD 602
                                        |...:..:::.|...||                    
Zfish   458 ----------------------------LMGEVSDEEEATEIEDE-------------------- 474

  Fly   603 DLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENGSIKYYLVENFVFDSLYS 667
                                                       .|.|.||::             
Zfish   475 -------------------------------------------NHRNNSIRH------------- 483

  Fly   668 LIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSI 732
                                                                             
Zfish   484 ----------------------------------------------------------------- 483

  Fly   733 NAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQA 797
                                                                             
Zfish   484 ----------------------------------------------------------------- 483

  Fly   798 LAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWW 862
                                                                             
Zfish   484 ----------------------------------------------------------------- 483

  Fly   863 IGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIEIFGAVASLFESNDPGIIFKLQI 927
                                                                             
Zfish   484 ----------------------------------------------------------------- 483

  Fly   928 QTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPF 992
                                                    |.|:...|::||:||.::|.:||.|
Zfish   484 ----------------------------------------RSKKSKQRLSKELSDCVVYCKSVHF 508

  Fly   993 ------REHSWIFQEMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPFW 1051
                  |.|| .|.|:|||.|:||.|...:...: |:.::..|:|||||.|.|.|||||||...|
Zfish   509 SSFKHSRNHS-KFYEISSFTESKARKHIREAGAE-FVLHNARQLSRVYPSGLRTDSSNFNPQDLW 571

  Fly  1052 NVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKS--DSFNPNNPL-CDGLSEVKVSI 1113
            |.|.|::|||:||....|.||...|..||:|||:|||:||::  :.|:|.||. .:....:.:||
Zfish   572 NAGCQIVALNFQTAGVEMDLNDGLFNQNGRCGYVLKPAFMRNFEEMFDPENPQNREDYKPLSLSI 636

  Fly  1114 RLIAARHL----FRGGKSNNPQIVVELIGASFDTGVKYRTKVNENGFNPVWNESCEFNVRNPQFA 1174
            ::|:.:.|    .:.|...:|.:.||:.|...|...:....::.|||||||.::.:|.:..|:.|
Zfish   637 QVISGQQLPKVNIKEGSIIDPFVRVEIHGVPLDQAKQETRYIDNNGFNPVWYDTLQFTIHAPELA 701

  Fly  1175 ILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFSEELELSSLLINIKIANVT 1234
            ::||.|:|.|..::..|:.|...|.|||:.|||.:.|.:|....:..|||.::|:|.|:|
Zfish   702 LVRFVVEDYDKTSKNDFVGQFTLPFTCIQPGYRHIHLLSKDGTSIPPSSLFVHIRITNLT 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 26/126 (21%)
PI-PLCc_gamma 323..>470 CDD:176534 79/147 (54%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 4/97 (4%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 0/99 (0%)
SH3_PLCgamma 828..880 CDD:212759 0/51 (0%)
PLCYc 981..1091 CDD:128454 55/115 (48%)
C2_PLC_like 1109..1215 CDD:175974 35/109 (32%)
plcd4aXP_694028.4 PH_PLC_delta 24..139 CDD:270169 26/126 (21%)
PH 32..129 CDD:278594 24/111 (22%)
EF-hand_7 149..205 CDD:290234 11/64 (17%)
EF-hand_10 159..208 CDD:291454 10/48 (21%)
PLN02228 212..753 CDD:177873 219/1010 (22%)
EF-hand_like 213..295 CDD:286375 21/92 (23%)
PI-PLCc_GDPD_SF 295..599 CDD:301322 145/762 (19%)
C2_PLC_like 631..758 CDD:175974 40/126 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586440
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X101
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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