DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and plcd4b

DIOPT Version :10

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_689964.4 Gene:plcd4b / 561475 ZFINID:ZDB-GENE-080512-3 Length:753 Species:Danio rerio


Alignment Length:1245 Identity:272/1245 - (21%)
Similarity:409/1245 - (32%) Gaps:540/1245 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLL----WATVATQTPRTDYEGAIQLREIRE 77
            |.:..::.|....|:..:..| .:||..|..:.:.:.    ||..:..|        ..:.::..
Zfish    13 QNLEAMKAGMFFRKVKSRMWR-RQRHYKLQDDCKTIAYKSSWAINSYST--------FSISDVEA 68

  Fly    78 IRVGKHSKEFRLFADDCQRFESSKCFVIL----HGNHFKLKSFSVVALSEIEADNWVRGLRYMVK 138
            :|.|..|:.....||:   |...:||.::    .||      ..:||.|..||..|::|:|.:::
Zfish    69 VREGHQSEALLGVADE---FPPDRCFTLVFRGRKGN------LDLVAESAEEAQAWIQGVRGLME 124

  Fly   139 DTLGAPYPLQIDRWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFMEHF 203
            :........::|:|          ::...:||......::..|:.|..|..::..|..    ||.
Zfish   125 NMENMDESTKLDQW----------ISDWFSKADRNKDGRINFKEAKKLLKMMNIDMNE----EHA 175

  Fly   204 -----TEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRPAELKQFLET 263
                 ..|..|...|:..:|...|:.|........:..       .||.|.|::...:|::||..
Zfish   176 CCLFKMADKSRSGTLEDQEFVEFYKMLTERREVLDLFQ-------DYSSDGQILSQCDLEEFLRE 233

  Fly   264 EQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFMDMNL 328
            ||.:..    ||...|..:.|..:..|.......::...|:.:|.|.:..::|.:...:|.||:.
Zfish   234 EQLEGE----SSYEHALQLIDRYEPSETARMNHSMSVDGFLMYLTSPEGSIFNPERQGIFQDMSQ 294

  Fly   329 PLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIK 393
            .|:.|:|:|||||||..||....||.|||.:||:.||||:|:|||||.:..|.::||||.||||.
Zfish   295 SLAHYYISSSHNTYLMEDQLKGPSSVEAYIQALKRGCRCVEVDCWNGANGEPVVYHGHTFTSKIL 359

  Fly   394 FMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRN-EQHLPSPY 457
            ..|||.||..:||.:||||:|:|||.:||:|||:.|||...|:.||||||...|.. ...||||.
Zfish   360 LKDVITTIASYAFKASEYPLIISIENHCSVEQQKVMAQQFREILGDMLLTSTADTEVSSELPSPE 424

  Fly   458 QLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLLYFKDP 522
            .|:|||:||.||                :||.|                                
Zfish   425 ALKRKILLKGKK----------------IGHES-------------------------------- 441

  Fly   523 VDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGE 587
                                    ||......|:|                              
Zfish   442 ------------------------ESPTAEVSDED------------------------------ 452

  Fly   588 NWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENGSI 652
                                                                             
Zfish   453 ----------------------------------------------------------------- 452

  Fly   653 KYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQAEQGLYR 717
                                                                    |.||     
Zfish   453 --------------------------------------------------------EAAE----- 456

  Fly   718 LEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRN 782
                                                        ||.||..|             
Zfish   457 --------------------------------------------MNKESSTS------------- 464

  Fly   783 VKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPK 847
                                                                             
Zfish   465 ----------------------------------------------------------------- 464

  Fly   848 HAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIEIFGAVAS 912
                                    :.|||                     ||             
Zfish   465 ------------------------ESLPA---------------------DG------------- 471

  Fly   913 LFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKKERTARVA 977
                                                                     |:....:.
Zfish   472 ---------------------------------------------------------KKSKQNLC 479

  Fly   978 KEMSDLIIYFRSVPFR--EHSWIF---QEMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKG 1037
            ||:|| |::.:||.|.  |||.|.   .|||||.|:||.| :.::....|:.::..|:.||||.|
Zfish   480 KELSD-IMFCKSVHFHSFEHSRISAKPYEMSSFSESKARK-YSKEAGSDFVLHNTRQLIRVYPSG 542

  Fly  1038 QRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDS--FNPNN 1100
            .|.||||:.|:..|::|.|::|||:||....|.||...|..||..||:|||..:::..  |:|..
Zfish   543 MRTDSSNYCPVDMWSMGCQIVALNFQTAGMEMDLNDGLFSQNGCSGYVLKPEILRNRERRFDPEK 607

  Fly  1101 P-LCDGLSEVKVSIRLIAARHLFRGGKSN-----NPQIVVELIGASFDTGVKYRTK-VNENGFNP 1158
            | ..:..:.:..|:::|:.:.|.: .|.|     :|.:.||:.|...|. .|..|| ::.|||||
Zfish   608 PEEHEDYNPLVFSVKVISGQQLPK-LKQNEWSIVDPFVRVEIYGVPLDQ-AKQETKYIDNNGFNP 670

  Fly  1159 VWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFSEELELSS 1223
            .||||.:|.|..|:.|::||.|:|.|..:...||.|...||:||:.|||.|.|.:|....:..||
Zfish   671 YWNESVQFTVHTPELALVRFVVEDHDKASRNDFIGQYTLPLSCIQPGYRHVHLLSKDGTSIRPSS 735

  Fly  1224 LLINIKIANV 1233
            :.::|||..:
Zfish   736 IFVHIKITEL 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 27/132 (20%)
EFh_PI-PLCgamma 152..311 CDD:320031 32/163 (20%)
EF-hand motif 152..191 CDD:320031 6/38 (16%)
EF-hand motif 198..226 CDD:320031 7/32 (22%)
EF-hand motif 230..265 CDD:320031 7/34 (21%)
EF-hand motif 277..311 CDD:320031 6/33 (18%)
PI-PLCc_gamma 323..>470 CDD:176534 83/147 (56%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 0/97 (0%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 8/99 (8%)
SH3_PLCgamma 828..880 CDD:212759 3/51 (6%)
PLCYc 981..1091 CDD:128454 51/114 (45%)
C2_PLC_like 1109..1215 CDD:175974 43/111 (39%)
plcd4bXP_689964.4 PH-like 18..130 CDD:473070 27/129 (21%)
EF-hand_5 139..163 CDD:433035 4/23 (17%)
EF-hand_10 153..202 CDD:405477 11/52 (21%)
PLN02228 207..738 CDD:177873 225/1010 (22%)
PI-PLCc_delta 289..584 CDD:176535 151/761 (20%)

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