DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and plcd1b

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_005163413.1 Gene:plcd1b / 337489 ZFINID:ZDB-GENE-030131-9435 Length:772 Species:Danio rerio


Alignment Length:1263 Identity:265/1263 - (20%)
Similarity:420/1263 - (33%) Gaps:566/1263 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLLWATVATQTPRTDYEGAIQLREI 75
            |:.|.::.:..|..|..:.|:..:..:..|  ...::|..:.:|.. :.:|.:|  :....:.:|
Zfish    33 LVLEGDRDLQFLMNGGDLLKVRSESWKKTR--YFKLQEDCKTMWHE-SKKTLKT--KQTFSIEDI 92

  Fly    76 REIRVGKHSKEFRLFADDCQRFESSKCFVILHGNHFKL------KSFSVVALSEIEADNWVRGLR 134
            .|:|.|:.:...|.:.::           .|.|..|.:      ||..::|.:|.||..||.||.
Zfish    93 EEVRTGRQTDSLRKYTEE-----------TLEGRAFSILFKGRQKSLDLIASTEEEAKKWVSGLE 146

  Fly   135 YMVKDTLGAPYPLQIDRWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVS-------- 191
            .::..........:.:.|:   |..:.       ||.:....::::|:.|.||..::        
Zfish   147 KVISSLNNLSSQKKTEHWI---YSSLR-------KADKNLDNKMSLKEVKSFLKDINVEVHEDYA 201

  Fly   192 ------CKMTTGKFM-----EHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPY 245
                  |..:.|.|:     |||.:.:.::.::                   .|:.|.      |
Zfish   202 EMLFKECDKSNGGFLEGNEIEHFYKILTKREEI-------------------DVIYGE------Y 241

  Fly   246 SEDQQVVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSK 310
            ::...::...:|..||.||||:    |:|.......|..:..| |....:..:|...|:.:|...
Zfish   242 AKTDGLMSANDLLNFLLTEQRE----EVSQNDALQLIEKYELD-ENAKAKQQMTQDGFLMYLHQP 301

  Fly   311 QNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNG 375
            :..::|..:..|:.|||.|||.|:|:|||||||..||....||.|||.|||..||||:|||||:|
Zfish   302 EGLIFNQAHKSVYHDMNQPLSHYFISSSHNTYLMEDQLKGPSSTEAYIRALLKGCRCVELDCWDG 366

  Fly   376 PDNLPYIFHGHTITSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDM 440
            .|..|.|:||:|:||||.|.||||.||::||.:||||||||:|.:|.:|||:.|||.|..:.|..
Zfish   367 SDGEPVIYHGYTLTSKILFKDVIKAIKEYAFKTSEYPVILSLENHCGVEQQKIMAQHLTSILGSA 431

  Fly   441 LLTQPC-DRNEQHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGEND 504
            |:|:|. |:....||:|.:|:.:.|:|.|:|   |.:.|..|....:.                |
Zfish   432 LVTKPLGDQMPTCLPAPEELKGRFIVKGKRL---DKLENAFSDESKMA----------------D 477

  Fly   505 GENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSN 569
            .|:|                                           :.|:||            
Zfish   478 EESV-------------------------------------------SEEEDD------------ 487

  Fly   570 MQQKQKDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWR 634
                                                                             
Zfish   488 ----------------------------------------------------------------- 487

  Fly   635 RNRPNHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQ 699
                                                                             
Zfish   488 ----------------------------------------------------------------- 487

  Fly   700 EWFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNF 764
                                                                             
Zfish   488 ----------------------------------------------------------------- 487

  Fly   765 ESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTC 829
                                                  :||                  |||   
Zfish   488 --------------------------------------EGD------------------EEN--- 493

  Fly   830 KALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNE 894
                                                                           ||
Zfish   494 ---------------------------------------------------------------NE 495

  Fly   895 EGTDGRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALI 959
                                                                             
Zfish   496 ----------------------------------------------------------------- 495

  Fly   960 ASQLASERRKKERTARVAKEMSDLIIYFRSVPF-------REHSWIFQEMSSFPETKAEKQFFQQ 1017
                     ||..:.::|||:||::||.:||||       .:||  |.||:||.|.||.|...:.
Zfish   496 ---------KKSGSLKLAKELSDIVIYCKSVPFHGLEDSREKHS--FYEMASFKEGKALKLAEES 549

  Fly  1018 NTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQC 1082
            .|: ::.::.:::||:||.|.|.||||:||:|.||.|.|::|||:||....|.|||..|..||:.
Zfish   550 ATE-YIRHNTDKLSRIYPGGMRTDSSNYNPVPMWNAGCQIVALNFQTPCLEMDLNQGLFYQNGRS 613

  Fly  1083 GYILKPSFM--KSDSFNPNNPLCDG--LSEVKVSIRLIAARHLFRGGKSN----NPQIVVELIGA 1139
            |||||||::  :...|:|.. |..|  |....:.:.:|:|:.|.:.||..    :|.:.|::.|.
Zfish   614 GYILKPSYLRERDTEFDPIT-LTKGPWLKRKTLHVMVISAQQLPKVGKRESAIVDPIVKVQVYGV 677

  Fly  1140 SFDTGVKYRTKVNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQ 1204
            ..||.....:.:..|||||:|||:.:..|..|..|::||.::|.|..::..||.|...|...:|.
Zfish   678 PADTAAVETSYIKNNGFNPMWNENFQLEVCVPDLALVRFLIEDYDSTSDNEFIGQYTLPFNSLRN 742

  Fly  1205 GYRSVILRNKFSEELELSSLLINIKIAN 1232
            ||..|.|..:....|..:.|.::|.:.:
Zfish   743 GYHHVPLLTQDGNLLSSAGLFVHIMVVD 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 26/130 (20%)
PI-PLCc_gamma 323..>470 CDD:176534 83/147 (56%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 0/97 (0%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 0/99 (0%)
SH3_PLCgamma 828..880 CDD:212759 0/51 (0%)
PLCYc 981..1091 CDD:128454 56/116 (48%)
C2_PLC_like 1109..1215 CDD:175974 34/109 (31%)
plcd1bXP_005163413.1 PH_PLC_delta 44..159 CDD:270169 26/130 (20%)
PH 48..150 CDD:278594 24/117 (21%)
EF-hand_10 179..228 CDD:291454 10/48 (21%)
PLN02228 232..764 CDD:177873 222/1030 (22%)
EF-hand_like 233..314 CDD:286375 19/110 (17%)
PI-PLCc_delta1 314..610 CDD:176566 152/763 (20%)
C2_PLC_like 643..768 CDD:175974 37/124 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586417
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R928
SonicParanoid 1 1.000 - - X101
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.780

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