DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sl and Plcl2

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_038939092.1 Gene:Plcl2 / 301173 RGDID:1305941 Length:1128 Species:Rattus norvegicus


Alignment Length:1279 Identity:264/1279 - (20%)
Similarity:425/1279 - (33%) Gaps:570/1279 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FSAM-SAPLLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLLWATVATQTPRTDYE 67
            ||:| :...:......|..:..|:.:.|:.... |...|:.:|..:.:.|.|     :..:.|.|
  Rat   125 FSSMPTEKKISSASDCINSMVEGSELKKVRSNS-RIYHRYFLLDADMQSLRW-----EPSKKDSE 183

  Fly    68 GA-IQLREIREIRVGKHSKEFR------LFADDCQRFESSKCFVILHGNHFKLKSFSVVALSEIE 125
            .| |.::.|:|:|.||::..||      ..::||       .|.:::|.::  :|..:||.|...
  Rat   184 KAKIDIKSIKEVRTGKNTDIFRSNGISEQISEDC-------AFSVIYGENY--ESLDLVANSADV 239

  Fly   126 ADNWVRGLRYMV---KDTLGAPYPLQIDR---WLRREYYQIE-----------------NVNTHS 167
            |:.||.||||::   |.||......|.:.   |:.:.:.:|:                 |:|   
  Rat   240 ANIWVTGLRYLISYGKHTLDMLESSQDNMRTCWVSQMFSEIDVDDLGHITLCNAVQCIRNLN--- 301

  Fly   168 AKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFMEHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFA 232
             ...:.|..::..|:..........::|..:|:|.|.|...|         ..:|..|:      
  Rat   302 -PGLKTSKIELKFKELHKSKDKTGTEITKEEFVEVFHELCTR---------PEIYFLLV------ 350

  Fly   233 SVLSGSGVANFPYSEDQQVVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEP- 296
                       .:|.:::.:...:|..|||.||   ..:.|:.......|..:  :..::.||. 
  Rat   351 -----------QFSSNKEFLDTKDLMMFLEAEQ---GVAHINEEISLEIIHKY--EPSKEGQEKG 399

  Fly   297 YLTFPEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARAL 361
            :|:...|.::|.|....:::.::.:|..||..|||.|:|.|||||||..|||...|....|.|||
  Rat   400 WLSIDGFTNYLMSPDCYIFDPEHKKVCQDMKQPLSHYFINSSHNTYLIEDQFRGPSDITGYIRAL 464

  Fly   362 RMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQ 426
            :||||.:|||.|:||||.|.|:.|||:||:|.|..||..|..:||.:||||:||.:|.:||::||
  Rat   465 KMGCRSVELDVWDGPDNEPVIYTGHTMTSQIVFRSVIDIINKYAFFASEYPLILCLENHCSIKQQ 529

  Fly   427 RNMAQALIEVFGDMLLTQPCDRNEQHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSS 491
            :.|.|.:.::.||.|.|...:..|.:||||..|:.||::|.||                      
  Rat   530 KVMVQHMKKILGDKLYTTSPNMEESYLPSPDVLKGKILIKAKK---------------------- 572

  Fly   492 LGGAGGGAHGENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDD 556
                                                                             
  Rat   573 ----------------------------------------------------------------- 572

  Fly   557 DFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRES 621
               |||:||                                                        
  Rat   573 ---LSSNCS-------------------------------------------------------- 578

  Fly   622 ATFVGDYSLSFWRRNRPNHCRIKLKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIIL 686
                                                                             
  Rat   579 ----------------------------------------------------------------- 578

  Fly   687 KEPVPQPKKHEDQEWFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIM 751
                                                                             
  Rat   579 ----------------------------------------------------------------- 578

  Fly   752 QEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGA- 815
                                                             ..:||.:  .:|.|| 
  Rat   579 -------------------------------------------------GVEGDVT--DEDEGAE 592

  Fly   816 -SNYMGSNLEENVTCKALYSYKANKPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYV 879
             |..||..                              ||::.|              |:|    
  Rat   593 MSQRMGKE------------------------------NVEQPN--------------HVP---- 609

  Fly   880 KVIDSTTEDYNSLNEEGTDGRTDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQE 944
                                                                             
  Rat   610 ----------------------------------------------------------------- 609

  Fly   945 TAYEWIKAIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPFREHSWIFQ-----EMSS 1004
                 :|..|                     :.|::|:|:...:||.|:|....||     |:.|
  Rat   610 -----VKRFQ---------------------LCKDLSELVSICKSVQFKEFQVSFQVQKYWEVCS 648

  Fly  1005 FPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAM 1069
            |.|..|.| :..:|...|::|::..::||:|...|:||||.||..||..|.|::|:|:||....|
  Rat   649 FNEVLASK-YANENPGDFVNYNKRFLARVFPSPMRIDSSNMNPQDFWKCGCQIVAMNFQTPGLMM 712

  Fly  1070 QLNQAKFRNNGQCGYILKPSFMKSD----SFNPNNPLCDGLSEVKVSIRLIAARHLFR----GGK 1126
            .||...||.||.|||:|:|:.|:.:    |.|..:.: .|:|...:.|::|:.::..:    |.|
  Rat   713 DLNIGWFRQNGNCGYVLRPAIMREEVSFFSANTKDSV-PGVSPQLLHIKIISGQNFPKPKGSGAK 776

  Fly  1127 SN--NPQIVVELIGASFDTGVKYRTK-VNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAE 1188
            .:  :|.:.||:.|...|. .:.||| ||:||..|:::||.||.:..|:.|::||.|.|:|...:
  Rat   777 GDVVDPYVYVEIHGIPADC-AEQRTKTVNQNGDAPMFDESFEFQINLPELAMVRFVVLDDDYIGD 840

  Fly  1189 THFIAQACYPLTCIRQGYRSVILRNKFSEELELSSLLINIKIAN 1232
             .||.|...|..|::.|||.|.|::...|.|..:||.:::.|.|
  Rat   841 -EFIGQYTIPFECLQTGYRHVPLQSLTGEVLAHASLFVHVAITN 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 36/134 (27%)
PI-PLCc_gamma 323..>470 CDD:176534 75/146 (51%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 0/97 (0%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 0/99 (0%)
SH3_PLCgamma 828..880 CDD:212759 5/51 (10%)
PLCYc 981..1091 CDD:128454 47/114 (41%)
C2_PLC_like 1109..1215 CDD:175974 38/112 (34%)
Plcl2XP_038939092.1 PH_PLC_eta 144..252 CDD:270170 33/122 (27%)
EFh_PRIP2 272..415 CDD:320053 29/177 (16%)
EF-hand motif 272..301 CDD:320053 3/28 (11%)
EF-hand motif 308..339 CDD:320053 5/30 (17%)
EF-hand motif 344..372 CDD:320053 7/44 (16%)
EF-hand motif 381..414 CDD:320053 7/34 (21%)
PI-PLCc_PRIP_metazoa 426..722 CDD:176539 137/762 (18%)
C2_PLC_like 754..882 CDD:175974 42/129 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345390
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X101
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.