DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and Plcd3

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_001099315.3 Gene:Plcd3 / 287745 RGDID:1310903 Length:785 Species:Rattus norvegicus


Alignment Length:1233 Identity:273/1233 - (22%)
Similarity:417/1233 - (33%) Gaps:512/1233 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETRQLLWATVATQTPRTDYEGAIQLREIR 76
            |.|.|....|| ||:.:.|:  :.|...:..|..::|....:|  ...:.||...:....::.|.
  Rat    52 LTEDEDVQAML-RGSKLLKI--RSRTWHKERLYRLQEDGLSVW--FQRRIPRAASQHIFFVQHIE 111

  Fly    77 EIRVGKHSKEFRLFADDCQRFESSKCFVILHGNHFK--LKSFSVVALSEIEADNWVRGLRYMVKD 139
            .:|.|..|:..|.|..   .|..::|..|.    ||  .|:..:.|.:..||..|||||      
  Rat   112 AVREGHQSEGLRRFGG---AFAPARCLTIA----FKGRRKNLDLAAPTAEEAQRWVRGL------ 163

  Fly   140 TLGAPYPLQIDRWLRREYYQIEN-VNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFMEHF 203
               |....::|...:||  :::: ::::..:|.....::::.|:.|..|..|:..|........|
  Rat   164 ---AKLRARLDAMSQRE--RLDHWIHSYLHRADSDQDSKMSFKEIKSLLRMVNVDMNDMYAYRLF 223

  Fly   204 TE-DVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRPAELKQFLETEQRD 267
            .| |......|:..:.....::||.......:..       .||.:.:|:..:||.:|||.:..|
  Rat   224 KECDHSNNERLEGAEIEAFLRRLLKRPELEEIFR-------RYSGEDRVLSASELLEFLEDQGED 281

  Fly   268 VSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSS 332
            .:....:...|.::..:     |...|...:|...|:.:|.|.:....|..:..||.||..||:.
  Rat   282 GATLACAQKLIQTYELN-----ETAKQHELMTLDGFMMYLLSPEGAALNVAHTCVFQDMGQPLAH 341

  Fly   333 YWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDV 397
            |:|:||||||||..|....||.|||.||...||||:|||||.||...|.|:||||:||||.|.||
  Rat   342 YFISSSHNTYLTDSQIGGTSSTEAYIRAFTQGCRCVELDCWEGPGGEPVIYHGHTLTSKILFRDV 406

  Fly   398 IKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCD-RNEQHLPSPYQLRR 461
            |:.::|||||.|.||||||:|.:|.||||..||:.|..:.||||:||..| :|.:.||||.||:.
  Rat   407 IQAVRDHAFTLSPYPVILSLENHCGLEQQIVMARHLRNILGDMLVTQALDSQNPEELPSPEQLKC 471

  Fly   462 KIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLLYFKDPVDKS 526
            ::::|.||||                           |....||.                    
  Rat   472 RVLVKGKKLP---------------------------AARNEDGR-------------------- 489

  Fly   527 WNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFH 591
                  :|:.:|              .||:|                                  
  Rat   490 ------ILSDRE--------------DEDED---------------------------------- 500

  Fly   592 GKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENGSIKYYL 656
                  .:||::.|              |:|.          :|.|...                
  Rat   501 ------EEEAEEAL--------------ETAE----------QRKRAKQ---------------- 519

  Fly   657 VENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQAEQGLYRLEIG 721
                :...|.:|:||.....||:       .||.|.|.:                          
  Rat   520 ----ISPELSALVVYCCATRLRT-------LEPSPGPPQ-------------------------- 547

  Fly   722 SFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLS 786
                                                                             
  Rat   548 ----------------------------------------------------------------- 547

  Fly   787 HPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAII 851
                                                     .||                     
  Rat   548 -----------------------------------------PCK--------------------- 550

  Fly   852 TNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIEIFGAVASLFES 916
                                                                      :.||   
  Rat   551 ----------------------------------------------------------IGSL--- 554

  Fly   917 NDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKKERTARVAKEMS 981
                                                            |||:.::.|        
  Rat   555 ------------------------------------------------SERKARKFT-------- 563

  Fly   982 DLIIYFRSVPFREHSWIFQEMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFN 1046
                       ||               |...|.:.|||        |::||||.|.|:.|:|:|
  Rat   564 -----------RE---------------AGTSFVRHNTQ--------QLTRVYPLGLRMTSANYN 594

  Fly  1047 PMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMK--SDSFNPNNPLCDGLSEV 1109
            |...||.|.|::|||:||....|.||..:|..||||||:|||::::  :.:|:|.   |.|....
  Rat   595 PQEMWNSGCQLVALNFQTPGYEMDLNTGRFLINGQCGYVLKPAYLRQLNTTFDPE---CPGPPRT 656

  Fly  1110 KVSIRLIAARHL--FRGGKSN---NPQIVVELIGASFDTGVKYRTKVNENGFNPVWNESCEFNVR 1169
            .::::::.|:.|  ....|.|   :|.:.||:.|...|...|....|..|||||.|.::.:|.:|
  Rat   657 TLTVQVLTAQQLPKLNVEKPNSIVDPLVRVEIYGVPEDCAHKETDYVLNNGFNPCWEQTLQFQLR 721

  Fly  1170 NPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFSEELELSSLLINIKIAN 1232
            .|:..::||.|:|.|..:...|:.|...||..::||||.:.|.:|....|..::|.::|:|.|
  Rat   722 APELVLVRFVVEDYDTTSPNDFVGQFTLPLNSLKQGYRHIHLLSKDGASLSPATLFVHIRIEN 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 31/126 (25%)
PI-PLCc_gamma 323..>470 CDD:176534 85/147 (58%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 13/97 (13%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 0/99 (0%)
SH3_PLCgamma 828..880 CDD:212759 2/51 (4%)
PLCYc 981..1091 CDD:128454 40/109 (37%)
C2_PLC_like 1109..1215 CDD:175974 34/110 (31%)
Plcd3NP_001099315.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345394
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X101
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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