DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sl and plc1

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_594734.1 Gene:plc1 / 2541439 PomBaseID:SPAC22F8.11 Length:899 Species:Schizosaccharomyces pombe


Alignment Length:1251 Identity:244/1251 - (19%)
Similarity:385/1251 - (30%) Gaps:578/1251 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VTKLYGKQRR----PDRRHLMLIRETRQLLWATVATQTPRTDYEGAIQLREIREIRVGKHSKEFR 88
            :||...:||:    |...:|||.:.|.:.             |: .:.:.:|:|||.|:.::.:|
pombe   174 ITKKKVRQRKVSLDPISGYLMLDKNTGKA-------------YK-KLCVDDIKEIRQGRDARNYR 224

  Fly    89 LFADDCQRFESS-----KCFVILHGNHFKLKSFSVVALSEIEADN-WVRGLR----YMVKDTL-- 141
                  ::::.|     :.|.|::....|||:..::: ..::|.| |:..|.    |.:.:.:  
pombe   225 ------EQYKISSENEKRWFTIIYCADNKLKAMHMIS-PTLDAHNQWIMALEGLKTYRLNEFIIG 282

  Fly   142 -------GAPYPLQIDRWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKF 199
                   |..   .||       |. ||:|.......||| ||:.:.|....     |:|.....
pombe   283 LNLVCHQGEK---MID-------YS-ENLNPWEKLEKEQS-AQLDLGDVHRM-----CQMLHLNA 330

  Fly   200 MEHFTEDVRRKHD------LKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRPAELK 258
            ...|.|:..:|.|      |.|::|......|...:....:..       .|:.....:...:.:
pombe   331 SMEFLEETFQKADADHSGKLSFEEFQHFVSLLKTRSEIVDIFK-------EYTSGSDKMSLEQFR 388

  Fly   259 QFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVF 323
            .||.|.|:    :.:.|.:|.:....|..:     .:..:...||..||.|..    ||....|.
pombe   389 HFLSTSQK----ARLDSDSIRTLYVSFCSN-----DDSKMGLIEFTSFLLSPH----NSPVVPVI 440

  Fly   324 MDMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTI 388
            .||:.||:.|.|:|||||||.|.||..|||.|.|.|:|:.||:|||:|||:|| |.|.:.||||.
pombe   441 QDMSRPLNEYLISSSHNTYLLGKQFGGESSIEGYIRSLQRGCKCIEIDCWDGP-NGPVVCHGHTF 504

  Fly   389 TSKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRNEQHL 453
            ||.|||.|||..|:.:||..|.||:.:|:|.:|..:|||.|...:.:.|||.|:.:|...||..|
pombe   505 TSMIKFNDVIDAIRKYAFVVSPYPLFISLEIHCCPDQQRQMVSYMKQAFGDTLVMKPVTANESVL 569

  Fly   454 PSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLLY 518
            |||..|..||:||                                                    
pombe   570 PSPEDLLNKILLK---------------------------------------------------- 582

  Fly   519 FKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSANDEL 583
                                                                             
pombe   583 ----------------------------------------------------------------- 582

  Fly   584 HFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHE 648
                                              |:.|||                         
pombe   583 ----------------------------------VKCSAT------------------------- 588

  Fly   649 NGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQAEQ 713
                                                                             
pombe   589 ----------------------------------------------------------------- 588

  Fly   714 GLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYTRNP 778
                                                                            |
pombe   589 ----------------------------------------------------------------P 589

  Fly   779 LYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDEL 843
            |       |..|.::|:                                                
pombe   590 L-------HQFSTDILK------------------------------------------------ 599

  Fly   844 SFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIEIFG 908
                                               |.:.||:|:            .|:|.|:  
pombe   600 -----------------------------------VGITDSSTD------------TTESSEL-- 615

  Fly   909 AVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKKERT 973
                                            :|                  |:|...|:.|.|.
pombe   616 --------------------------------EN------------------SELTGLRKGKRRM 630

  Fly   974 AR-VAKEMSDLIIYFRSVPFREHSWIFQEMSSFPETKAEKQFFQQNTQLF----------LSYHR 1027
            .. :.:|:..|..|.||:.||..        |.||:|.....|..:.:..          ||.|.
pombe   631 KNIIVQELQQLAPYARSLKFRNF--------SLPESKTYSHIFSFSERTIKKHGKAMVPRLSKHN 687

  Fly  1028 -NQISRVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFM 1091
             ..:.||||...|:.|:||||..:|.:|.||:|||:||.|..:|:|.|.|..:...||:|||...
pombe   688 LRYLCRVYPGPLRVGSTNFNPQVYWRLGVQMVALNWQTYDTGLQINDALFIADPPTGYLLKPPCQ 752

  Fly  1092 KSDSFNPNNPLCDGL-SEVKVSIRLIAARHLFRGGKSNNPQIV---VEL-IGASFDTGVKYRTK- 1150
            :........   :|| .::|::|.:|:.:.|.|..:.:|.:.:   ||: :.:..::..::.:| 
pombe   753 RIIGTTVGE---EGLPRKIKLTIDVISGQQLRRARELSNSETLSPYVEIQVHSMEESPFRWCSKV 814

  Fly  1151 VNENGFNPVWNESCEFN--VRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRN 1213
            |:||||.|.|.|:..:.  :.:..::::||.|............|....|:..::||||.:.|.:
pombe   815 VHENGFRPFWGETMVYESIISDDFYSMIRFLVHHRGSNGNDSIFANFTCPIDRLQQGYRHIRLLD 879

  Fly  1214 KFSEELELSSLLINIK 1229
            ...|.|..|||.:.||
pombe   880 MQGENLLFSSLFLKIK 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 28/141 (20%)
PI-PLCc_gamma 323..>470 CDD:176534 76/146 (52%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 4/97 (4%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 5/99 (5%)
SH3_PLCgamma 828..880 CDD:212759 0/51 (0%)
PLCYc 981..1091 CDD:128454 43/120 (36%)
C2_PLC_like 1109..1215 CDD:175974 27/112 (24%)
plc1NP_594734.1 PH_PLC_fungal 165..277 CDD:241514 27/123 (22%)
EFh 303..360 CDD:238008 15/62 (24%)
EF-hand_7 303..359 CDD:290234 15/61 (25%)
PLN02228 367..883 CDD:177873 187/1006 (19%)
EF-hand_like 367..438 CDD:286375 15/90 (17%)
PI-PLC1c_yeast 441..737 CDD:176540 136/763 (18%)
C2_PLC_like 767..897 CDD:175974 34/129 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1032
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 285 1.000 Inparanoid score I648
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto101412
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R928
SonicParanoid 1 1.000 - - X101
TreeFam 1 0.960 - -
87.850

Return to query results.
Submit another query.