DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and Plcb1

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:NP_001071109.1 Gene:Plcb1 / 24654 RGDID:3344 Length:1216 Species:Rattus norvegicus


Alignment Length:1242 Identity:254/1242 - (20%)
Similarity:405/1242 - (32%) Gaps:524/1242 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LIRETRQLLWATVAT-QTP---RTDYEG-------------AIQLREIREIRVGKHSK-----EF 87
            |.:.|:.:.|...:| .||   |||.:|             .:.|..:::.|.|||:|     :.
  Rat    22 LKKGTKFVKWDDDSTIVTPIILRTDPQGFFFYWTDQNKETELLDLSLVKDARCGKHAKAPKDPKL 86

  Fly    88 RLFAD--DCQRFESSKCFVILHGNHFKLKSFSVVALSEIEADNWVRGLRYMVKDTLGAPYPLQID 150
            |...|  :....|.....|:...:...:...::||..|..|..|...:..:..:.|.  ..:..|
  Rat    87 RELLDVGNIGHLEQRMITVVYGPDLVNISHLNLVAFQEEVAKEWTNEVFSLATNLLA--QNMSRD 149

  Fly   151 RWLRREYYQIENVNTHSAKATEQSPAQVTIKD-FKLFLAG--------VSCKMTTGKF----MEH 202
            .:|.:.|.::        |.......::.:|: ::||.|.        .:|.:.:.:.    .|.
  Rat   150 AFLEKAYTKL--------KLQVTPEGRIPLKNIYRLFSADRKRVETALEACSLPSSRNDSIPQED 206

  Fly   203 FTEDVRRKHDLKFDDFSRLYQKLLLPN-GFASVLSGSGVANFPYSEDQQVVRPAELKQFLETEQR 266
            ||.||           .|::...|.|. ...::.|..|..:.||....|::      .|:..:||
  Rat   207 FTPDV-----------YRVFLNNLCPRPEIDNIFSEFGAKSKPYLTVDQMM------DFINLKQR 254

  Fly   267 DVSASEISSAAI-ASFIRDFVQDVERD---VQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFMDMN 327
            |...:||....: ...::..::..|.:   .::..::...|:.:|..::|.:.:.:...:..||:
  Rat   255 DPRLNEILYPPLKQEQVQVLIEKYEPNSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMS 319

  Fly   328 LPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNG--PDNLPYIFHGHTITS 390
            .|||.|:|.||||||||..|.:..||.|.|.:.|..||||:|||||.|  .:..|.|.||.|:|:
  Rat   320 QPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTT 384

  Fly   391 KIKFMDVIKTIKDHAFTSSEYPVILSIEQNC-SLEQQRNMAQALIEVFGDMLLTQPCDR----NE 450
            :|.|.:||:.|.:.||.:|.:|::||.|.:. |.:||..||:....:|||.||.:|.::    :.
  Rat   385 EISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESG 449

  Fly   451 QHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEG 515
            ..||||..|..||::|:||                ..|:||            :|...:|:.::.
  Rat   450 VPLPSPMDLMYKILVKNKK----------------KSHKSS------------EGSGKKKLSEQA 486

  Fly   516 LLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSLNSNMQQKQKDTSAN 580
            ...:.|.                   ||....|..|..|                    .||.::
  Rat   487 SNTYSDS-------------------SSVFEPSSPGAGE--------------------ADTESD 512

  Fly   581 DELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKL 645
            |:                 :.||..||                                      
  Rat   513 DD-----------------DDDDDCKK-------------------------------------- 522

  Fly   646 KHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKEQ 710
                                             ||                              
  Rat   523 ---------------------------------SS------------------------------ 524

  Fly   711 AEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYYT 775
                                                    |.||.. |.:.|..|.:.:|:||. 
  Rat   525 ----------------------------------------MDEGTA-GSEAMATEEMSNLVNYI- 547

  Fly   776 RNPLYRNVKLSHPVSQELLRQALAEAAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKP 840
                       .||..|                                         |::.:|.
  Rat   548 -----------QPVKFE-----------------------------------------SFETSKK 560

  Fly   841 DELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDSIE 905
            ...||                                                            
  Rat   561 RNKSF------------------------------------------------------------ 565

  Fly   906 IFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERRKK 970
                                                                             
  Rat   566 ----------------------------------------------------------------- 565

  Fly   971 ERTARVAKEMSDLIIYFRSVPFREHSWIFQEMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYP 1035
                                          |||||.|||..:|..:...: |:.|::.|:||:||
  Rat   566 ------------------------------EMSSFVETKGLEQLTKSPVE-FVEYNKMQLSRIYP 599

  Fly  1036 KGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMK--SDSFNP 1098
            ||.|:||||:.|..|||.|.||:|||:||.|.|||:|...:..||:.||.|||.||:  ...|:|
  Rat   600 KGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLAMQINMGMYEYNGKSGYRLKPEFMRRPDKHFDP 664

  Fly  1099 -NNPLCDGLSEVKVSIRLIAARHLFRGGKSNNPQIVVELIGASFDTGVK-YRTKVNE-NGFNPVW 1160
             ...:.||:....:|:::|:.:  |...|.....:.|::.|...||..| ::||.:: |..||||
  Rat   665 FTEGIVDGIVANTLSVKIISGQ--FLSDKKVGTYVEVDMFGLPVDTRRKAFKTKTSQGNAVNPVW 727

  Fly  1161 NES-CEF-NVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFSEELELSS 1223
            .|. ..| .|..|..|.||....:|.    ..||.....|:..||.||..:.|||:.::.|.|.:
  Rat   728 EEEPIVFKKVVLPSLACLRIAAYEEG----GKFIGHRILPVQAIRPGYHYICLRNERNQPLMLPA 788

  Fly  1224 LLINIKI 1230
            :.:.|::
  Rat   789 VFVYIEV 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 26/125 (21%)
PI-PLCc_gamma 323..>470 CDD:176534 69/153 (45%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 6/97 (6%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 12/99 (12%)
SH3_PLCgamma 828..880 CDD:212759 4/51 (8%)
PLCYc 981..1091 CDD:128454 47/109 (43%)
C2_PLC_like 1109..1215 CDD:175974 34/109 (31%)
Plcb1NP_001071109.1 PH_PLC_beta 22..148 CDD:270167 26/127 (20%)
PLN02952 216..784 CDD:178538 210/1014 (21%)
EF-hand_like 224..314 CDD:286375 15/95 (16%)
PI-PLCc_beta 316..643 CDD:176533 146/761 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 469..534 24/274 (9%)
C2_PLC_like 677..796 CDD:175974 37/125 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..891
DUF1154 903..939 CDD:284131
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 967..989
PLC-beta_C 1003..1172 CDD:285865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1072..1095
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1172..1216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345382
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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