DRSC/TRiP Functional Genomics Resources

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Protein Alignment sl and plch2a

DIOPT Version :9

Sequence 1:NP_476726.2 Gene:sl / 32601 FlyBaseID:FBgn0003416 Length:1236 Species:Drosophila melanogaster
Sequence 2:XP_009302541.1 Gene:plch2a / 100334231 ZFINID:ZDB-GENE-030131-6367 Length:1557 Species:Danio rerio


Alignment Length:1254 Identity:314/1254 - (25%)
Similarity:497/1254 - (39%) Gaps:436/1254 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MEQTIGMLERGTIVTKLYGKQRRPDR-----RHLMLIRETRQLLWATVATQTPRTDYEGAIQLRE 74
            :|:.:..::.||.:.||.|..:...|     .|...||      |     :..|.:.:..|.:..
Zfish    79 VEKCMSSMQTGTQMVKLRGGSKGLVRFFYLDEHKSCIR------W-----RPSRKNEKAKISIDS 132

  Fly    75 IREIRVGKHSKEFRLFADDCQRFESSKCFVILHGNHFKLKSFSVVALSEIEADNWVRGLRYMV-- 137
            |||:..||.|:.|:.::|.  .|:.:.||.|.:|.|  ::|..:|:.:..||..|:.||:|::  
Zfish   133 IREVCEGKQSEIFQRYSDG--SFDPNCCFSIYYGEH--MESLDLVSGTGEEARTWITGLKYLMAG 193

  Fly   138 ---KDTLGAPYPLQIDRWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGK- 198
               :|:| |......|:||::.:          |:|.:.....::|.:....|..::..:...| 
Zfish   194 ISDEDSL-AKRQRTRDQWLKQTF----------AEADKNGDGCLSISEVLQLLHKLNVNLPRQKV 247

  Fly   199 ---FMEHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQVVRPAELKQF 260
               |.|..|:|  .:..|.|::|...|:.:       |......:....||..:..:...:||:|
Zfish   248 KQMFKEADTDD--NQGTLGFEEFCSFYKMM-------STRRDLYLLMLTYSNHKDHLDTDDLKRF 303

  Fly   261 LETEQRDVSAS-EISSAAIASFIRDFVQDVERDVQEPYLTFPEFVDFLFSKQNDLWNSKYDQVFM 324
            |||||:..:.| |.....:|.|     :....:.....|....|.:::.|...|::|.::.:|..
Zfish   304 LETEQKMTNVSKEHCLEIVAKF-----EPCPENQTSGVLGIDGFTNYMRSPAGDIFNPEHYEVNQ 363

  Fly   325 DMNLPLSSYWIASSHNTYLTGDQFSSESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTIT 389
            ||..|||.|:|||||||||.|||..|:|..:.||..|:.||||:|:|||:|.|..|.:.||:|:|
Zfish   364 DMTQPLSDYFIASSHNTYLMGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGQDGEPIVHHGYTLT 428

  Fly   390 SKIKFMDVIKTIKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDML--LTQPCDRNEQH 452
            |||.|.|||:||..:||..::||||||||.:||:.||:.|||.|.||.||.|  .:.|.|.:.. 
Zfish   429 SKILFKDVIETINKYAFAKNQYPVILSIENHCSVPQQKKMAQYLTEVLGDKLDVSSIPADPSGL- 492

  Fly   453 LPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAHGENDGENVRKVFKEGLL 517
            ||||..|:.||::|.||||                              .|..||.    :||.:
Zfish   493 LPSPEALKGKILIKGKKLP------------------------------SNIDENA----EEGDV 523

  Fly   518 YFKDPVDKSWNLYQFVLTHQELIYSSEINESRNGNSEDDDFGLSSSCSL---NSNMQQKQKDTSA 579
            ..:|..|:                           .|||       |.|   :::|.:||.:..|
Zfish   524 SDEDSADE---------------------------MEDD-------CKLLNGDTSMNRKQAENVA 554

  Fly   580 NDELHFGENWFHGKLEGGRKEADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIK 644
                              :|:.|:|:|:.|        :|:              |..|      
Zfish   555 ------------------KKKLDNLMKESK--------IRD--------------REDP------ 573

  Fly   645 LKHENGSIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQEWFHPNTTKE 709
                         ::|...:|                         |...||:      .:..|.
Zfish   574 -------------DSFTITAL-------------------------PPSGKHD------KSPLKG 594

  Fly   710 QAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEGRLYGIDTMNFESLVSLINYY 774
            :||.                                            ..||             
Zfish   595 KAED--------------------------------------------STDT------------- 602

  Fly   775 TRNPLYRNVKLSHPVSQELLRQALAEAAQGDHSG-GHDDNGASNYMGSNLEENVTCKALYSYKAN 838
                                         ||.:. |.:...|..:|||           :|.:..
Zfish   603 -----------------------------GDEANIGGNKRLARTFMGS-----------FSKRKK 627

  Fly   839 KPDELSFPKHAIITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGRTDS 903
            |..:                           :||                               
Zfish   628 KTSK---------------------------VKK------------------------------- 634

  Fly   904 IEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWIKAIQEAALIASQLASERR 968
                   :|.||..|..                                 ||::..||:..:...
Zfish   635 -------SSSFEDTDTD---------------------------------QESSSGASKAQAHHS 659

  Fly   969 KKERTARVAKEMSDLIIYFRSV--PFREHSWIFQEMSSFPETKAEKQFFQQNTQLFLSYHRNQIS 1031
            :|::|.::::.:||| :|.:||  |..|...:..::||..||||. |..||....|:.:::.|:|
Zfish   660 RKKKTMKLSRALSDL-VYMKSVGMPDFESQGVTWQVSSMSETKAH-QLIQQKPVPFMRFNQRQLS 722

  Fly  1032 RVYPKGQRLDSSNFNPMPFWNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDSF 1096
            ||||...|:|||||||.||||.|..::|||||:..:.:|||:|||..||.||||.||..:...||
Zfish   723 RVYPSPYRVDSSNFNPQPFWNAGCHLVALNYQSEGRVLQLNRAKFYCNGNCGYIQKPGCLCEGSF 787

  Fly  1097 NP--NNPLCDGLSEVKVSIRLIAARHLFR--------GGKSNNPQIVVELIGASFDTGVKYRTKV 1151
            ||  .:|| .|..:.::.:::|:.:.|.:        .|:..:|.:.||:||...|...:....|
Zfish   788 NPVAEDPL-PGRLKKQLILKVISGQQLPKPKDSMLGDRGEIIDPFVEVEIIGLPVDCCKEQTRVV 851

  Fly  1152 NENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLTCIRQGYRSVILRNKFS 1216
            ::|||||:|.|:..|.:..|:.|::||.|.|.|...: .||.|.......:..|||.|.|     
Zfish   852 DDNGFNPMWEETLVFTLHMPENALIRFLVWDHDPIGQ-DFIGQRTIAFNSMIPGYRHVYL----- 910

  Fly  1217 EELELSSLLINIKIANVTA 1235
            |.:|.:|:.:::.:.::|:
Zfish   911 EGMEEASIFVHVAVNDITS 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slNP_476726.2 PH_PLC_gamma 22..147 CDD:270168 37/134 (28%)
PI-PLCc_gamma 323..>470 CDD:176534 81/148 (55%)
SH2_N-SH2_PLC_gamma_like 584..682 CDD:199829 10/97 (10%)
SH2_C-SH2_PLC_gamma_like 696..796 CDD:198186 6/99 (6%)
SH3_PLCgamma 828..880 CDD:212759 4/51 (8%)
PLCYc 981..1091 CDD:128454 56/111 (50%)
C2_PLC_like 1109..1215 CDD:175974 33/113 (29%)
plch2aXP_009302541.1 PH_PLC_eta 86..192 CDD:270170 34/120 (28%)
EFh 210..276 CDD:238008 15/84 (18%)
EF-hand_7 211..272 CDD:290234 13/72 (18%)
PLN02952 252..910 CDD:178538 262/1029 (25%)
EF-hand_like 280..361 CDD:286375 19/85 (22%)
PI-PLCc_GDPD_SF 362..770 CDD:301322 187/763 (25%)
C2_PLC_like 800..924 CDD:175974 36/129 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586427
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X101
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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