DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9921 and Higd1b

DIOPT Version :9

Sequence 1:NP_001259608.1 Gene:CG9921 / 32599 FlyBaseID:FBgn0030743 Length:102 Species:Drosophila melanogaster
Sequence 2:NP_001099314.1 Gene:Higd1b / 287738 RGDID:1306907 Length:98 Species:Rattus norvegicus


Alignment Length:90 Identity:30/90 - (33%)
Similarity:46/90 - (51%) Gaps:15/90 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WIQLRQDLGPVAEVETTKEKLQRKIKENPLVPL---GCLATTAALTAGLYNFRT-GNRKMSQLMM 76
            |:       |....::..||..||.:|:||||:   |||...|   ..:|..:. |..|:|..::
  Rat     8 WV-------PPDSEDSLSEKFLRKTRESPLVPVGVGGCLVIAA---YRIYRLKARGPTKLSIHLI 62

  Fly    77 RSRIAAQGFTVMALVVGVVMT-YTD 100
            .:|:|||...|.|:::|.|.| |.|
  Rat    63 HTRVAAQACAVGAIMLGAVYTMYRD 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9921NP_001259608.1 HIG_1_N 44..91 CDD:282450 18/50 (36%)
Higd1bNP_001099314.1 HIG_1_N 29..79 CDD:398334 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4431
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1307900at2759
OrthoFinder 1 1.000 - - FOG0000673
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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