DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and RIM13

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_013875.1 Gene:RIM13 / 855186 SGDID:S000004763 Length:727 Species:Saccharomyces cerevisiae


Alignment Length:118 Identity:28/118 - (23%)
Similarity:45/118 - (38%) Gaps:26/118 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 SFHINPQLLISVQDEQD-------LVIALNQHTAVEPKVIGFTMYTWDGEYMLSECLQKDFFKNH 428
            :|..||...:.|..|||       ..|:.:.|..:..:|..|..|         |.::...|.||
Yeast   475 NFFQNPTFELEVHSEQDYQVLMDAACISTSSHDLINIQVYYFNDY---------ELIKPIMFDNH 530

  Fly   429 VSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLS 481
               .....|..:.|...|:::   |:::.:||.|.....|.:    ..|.|||
Yeast   531 ---YQPGQGLKQDVPILTNVK---YMIVCSTYGPPASTEFEL----LASIRLS 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004
Calpain_III 346..483 CDD:238132 28/118 (24%)
FRQ1 <567..648 CDD:227455
RIM13NP_013875.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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