DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and capn12

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_005173727.1 Gene:capn12 / 799247 ZFINID:ZDB-GENE-050419-245 Length:717 Species:Danio rerio


Alignment Length:738 Identity:206/738 - (27%)
Similarity:338/738 - (45%) Gaps:101/738 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFY--YQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVF 67
            ||.:|..|....||:.|..|.|.|||:..  ...|....:|.|..::.   |.||....:.... 
Zfish    18 YEVLLQTCLKSAVLFSDSVFAANQSSLGLPADPDPKKAVKWLRPKEIT---SNAVFVEGTMGTT- 78

  Fly    68 LNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEWVEVL 131
                   |:..|::|:.||::.|..|:....||.:||||.|:|:.:: |:|||:.|..||||||:
Zfish    79 -------DICQGQLGNCWLLAALSCLTMHPTLFVKVVPAGQSLSESYAGIFRFKFWQYGEWVEVV 136

  Fly   132 VDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPIL 196
            ||||||...|||.|...:.||.||:||:|||.|||.|||.:||.|..|:|:.|..||:...:|:.
Zfish   137 VDDRLPVREGRLLFSYSRTSNEFWSALVEKAYAKLIGSYGSLKGGIISEGMEDFTGGIAYSLPVS 201

  Fly   197 SDNIRP-----QTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLM 256
            |   ||     :.:...|....:::|.. .:.||  |::....|.|::....|.::...|||. .
Zfish   202 S---RPPRMLWKAITAALARNSLLSCFI-HATTV--KDIGTVTPEGLIKGHAYAITETGKVKK-A 259

  Fly   257 GDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARL-IRQLGPGEFWLSFCDFVE 320
            .:.|.|:.|::     |:| ...:.|.||...|.|:.|...|:.:| :.::..||||:|..||..
Zfish   260 SEEVFLLRLRN-----PWG-FVEYCGPWSDKCKDWDFVDNTEKTKLELAKVEDGEFWISIEDFCR 318

  Fly   321 IFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNH-ESFHINP--QLLISV 382
            .::|:|:..:|.::.:.||...:....|.:.:|||.|....:|||.|.: :||..||  |:::|.
Zfish   319 FYNTVEMCSVDPDSMSGEESEDTSTSSWTLSLHQGTWVPMCSAGGSRRYPKSFWKNPQYQMILSE 383

  Fly   383 QDEQD------------------------------------------LVIALNQHTAVEPKV--- 402
            :|..|                                          ||..|.::...:.||   
Zfish   384 KDVDDHDYGEGEEGDDGGDGEEDEDVSLLPPVSKTSKPGEKKKKCTVLVELLQKYRRQKDKVNFL 448

  Fly   403 -IGFTMYTWDGEYMLSE-CLQKDFF-KNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAE 464
             |.|.:|....|...|. .|.:.|| .|.....:..|.:.|.|....|||.|.||::.:||.|.:
Zfish   449 YIAFHIYKVPPELKDSPGSLDQQFFSSNRAISRSGKYRSIRSVWRKVHLEPGSYVILASTYRPNQ 513

  Fly   465 EAHFTVRILGTGSFRLSCLETQTMILLDPFPALKSTDAERCGGPKVKSVCQY--EPVYMQLADEN 527
            :..|.:||.         .:|..:.....||...:..|.....| |....||  :..:.:.|..:
Zfish   514 QGEFFLRIY---------TKTGNIQGFQDFPCTNNYSAMVMSKP-VLPEDQYRVQKWFEEKAGSD 568

  Fly   528 KTINCFELHELLEACLPNDYIKGCANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFK 592
            :.:|..:...|:.:.|..||.   ..::.|||:|..:|..|.||:...|.:..:.:|::.|.:|.
Zfish   569 ERVNAVQFMNLVNSVLEKDYE---LPLETCRQLIFGEDTGGRGRLDRAQAEKLLSSLRNLQSIFF 630

  Fly   593 MYTKEKAGILRAERLRDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFH 657
            .:.::.:|.:....|..||...|.:..:.::..|.:|:...:..|....|||.|..|...|:.:.
Zfish   631 QFDEDSSGTMSPFELSLALNAAGVECDSVVVQMLWERFGAGEQYLPFYGFVSCVARLQVLFDLYE 695

  Fly   658 LKNYGQVNVIEVHLHDWIKSILS 680
            .:...:|.  :..::.|:..:|:
Zfish   696 AETNQEVK--DKGINAWLLKLLA 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 112/330 (34%)
Calpain_III 346..483 CDD:238132 46/187 (25%)
FRQ1 <567..648 CDD:227455 19/80 (24%)
capn12XP_005173727.1 Peptidase_C2 32..327 CDD:279042 108/318 (34%)
Calpain_III 346..527 CDD:279416 47/189 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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