DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and capn10

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_009297070.1 Gene:capn10 / 570311 ZFINID:ZDB-GENE-110411-137 Length:649 Species:Danio rerio


Alignment Length:582 Identity:150/582 - (25%)
Similarity:239/582 - (41%) Gaps:140/582 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LWEDPDFPAVQSSVFYYQTPPFT-----FQWKRIMDLADSGSGAVAANSSAAPVFLNESAEFDVV 77
            ::.|.||||...|:|:..|.|.:     ..|.|..::...           ..:|.::..|....
Zfish    10 MFVDLDFPADDPSLFWDYTTPLSKLLDDVTWLRPQEICQQ-----------PQLFPDDPLEAHPK 63

  Fly    78 PGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTL---ASAHGVFRFRLWWCGEWVEVLVDDRLPTI 139
            .|.:||.||:....:|...::|..:|.|.:|.|   ::..|.|.||.|..|.|:||.||||||.|
Zfish    64 QGILGDCWLLCACSMLLKNQHLLDKVFPPEQPLWGDSAYRGEFLFRFWQNGHWIEVRVDDRLPCI 128

  Fly   140 NGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPI--------- 195
            |..|.|.:.|:...||.||||||.||||||||.|..|...:.:.||.|.|..:..|         
Zfish   129 NDNLCFSRCQSPRAFWVALLEKAYAKLHGSYEHLWAGQVCEAMVDLSGAVAVRWSIKDPESPQQP 193

  Fly   196 -----------LSDNIRPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSL 249
                       ||.:..|..|||    .|.::|.. .|||.....|.:.....::        ..
Zfish   194 NDSQIQHALHGLSVSDLPLELKE----RCAISCCV-HSATTGFPELGQFHAMCVM--------EW 245

  Fly   250 DKVKTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLS 314
            ..|.|:.|:.|||:.:::     |:|.:: :.|.|......|..:.......|:.:...||||:.
Zfish   246 TSVTTITGEGVQLIRIRN-----PWGRRS-WAGVWRERGSGWASLEASCAQTLLSRTAKGEFWMD 304

  Fly   315 FCDFVEIFSTMEV------------VYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCR 367
            ..:|::.|..:.|            :|.....::.:::             .|:|.:|.:|||||
Zfish   305 EAEFLQEFDEVTVGCPVNDAGHLQSIYTGNFLTHSQQI-------------GGRWVKGYSAGGCR 356

  Fly   368 NHESFHINPQLLISVQDEQDLVI--------------ALNQHTAVEPKVIGFTMYTWDGE---YM 415
            |:.:|..||:..:.|.:..::.:              |:.|||.::    ...::.|..|   :.
Zfish   357 NNSTFSSNPKFWLKVCERGEVFLSLLQCRRAESPAEGAIQQHTQLQ----AIALHVWKVEKKHFN 417

  Fly   416 LSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRL 480
            |:..|.|..|.:|.      :...|.|..||||..|.|:|:|:|:....|..|.:|:..:.|..|
Zfish   418 LTRTLNKQPFVSHA------HAYDREVVVHTHLNPGFYLLVPSTFLQGAEGPFLLRVHSSCSTSL 476

  Fly   481 SCLETQTMILLDPFPALKSTDAE--------------RCGG----------PKVKSVCQYEP 518
            |.:::      .|.|...|::.|              ..||          |:|.....|:|
Zfish   477 SVMKS------SPSPLQLSSEGEWENICSHGSWSIGSSAGGSRNFTTHELNPRVNLTVIYDP 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 98/350 (28%)
Calpain_III 346..483 CDD:238132 41/153 (27%)
FRQ1 <567..648 CDD:227455
capn10XP_009297070.1 CysPc 11..317 CDD:238004 97/335 (29%)
calpain_III 337..477 CDD:214786 39/162 (24%)
Calpain_III 492..619 CDD:294111 7/41 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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