DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and capn5a

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001073476.1 Gene:capn5a / 563346 ZFINID:ZDB-GENE-061103-214 Length:639 Species:Danio rerio


Alignment Length:577 Identity:166/577 - (28%)
Similarity:259/577 - (44%) Gaps:107/577 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KYERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFL 68
            ::..:...|:..:.|:|||.|.|...|:|..........|||..||.:.           ..:|:
Zfish    12 EFSALRKQCQQNHTLFEDPVFRAEDQSLFLQGNRLGKVTWKRPKDLCED-----------PHLFV 65

  Fly    69 NESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVP--ADQTL-----ASAHGVFRFRLWWCGE 126
            |..:..|:..|::|:.|.|:....|:|...|:.:|:|  .||..     .|..|:|.||.|..|:
Zfish    66 NGISAHDLNQGQLGNCWFVAACSSLASREALWQKVIPDWKDQEWDKNKPESYAGIFHFRFWRFGD 130

  Fly   127 WVEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVR 191
            ||.|::||||||.||:|.:.....||.||:||:|||.||:.|.||||..|..:|.|.|..|||..
Zfish   131 WVGVVIDDRLPTANGKLIYCHSNDSNEFWSALVEKAYAKMCGCYEALDGGNTADALVDFTGGVSE 195

  Fly   192 QMPIL------SDNIRPQTLKELLTT-------TCIV--TCLADKSATVAKKNLAERMPNGILVN 241
            .|.:|      .:..|.|....:|..       :|.:  |..||..|         |:..|::..
Zfish   196 PMDLLEGKFAQDEEARHQLFDRVLKVHNRGGLISCSIRATTQADMEA---------RLDCGLVKG 251

  Fly   242 VNYRLSSLDKVKTLMG-------DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVER 299
            ..|.::.:.||:...|       :.:.::.:::     |:|:: .:.|.||..|:.|:|||:.||
Zfish   252 HAYAVTDVRKVRLGSGLLAFFKSEKLSMIRMRN-----PWGQR-GWNGAWSDSSEEWKRVSKGER 310

  Fly   300 ARL-IRQLGPGEFWLSFCDFVEIFSTM------EVVYLDTETSNDEEMLKSRPLHWKMKMHQGQW 357
            .|| :.....||||:.|.||.:.|:.:      ...||....:.:||:::            |.|
Zfish   311 ERLGVTVEDDGEFWMDFDDFCKHFTDLILCRLINTSYLSIHKTWEEEVMR------------GCW 363

  Fly   358 KR-----GVTAGGCRNHE-SFHINPQLLISV-QDEQDLVIALNQ-----HTAVEPKVIGFTMYTW 410
            .|     ...:|||.||: :|..|||.:..| :.|.:::|.|.|     ....|...|||.:...
Zfish   364 SRHDDPLRNRSGGCINHKTTFLQNPQYVFDVTKAEDEVLICLQQQDKRARAKGENMAIGFDIQRV 428

  Fly   411 D-GEYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILG 474
            : ........:||       |..:|.|.|:|.|.....|:.|.||::|:|::|.....|.:||. 
Zfish   429 ELNRIYRMHSIQK-------SVGSSIYINSRSVFLRKDLKEGRYVIVPSTFDPGMPGDFLLRIF- 485

  Fly   475 TGSFRLSCLETQTMILLDPFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTIN 531
             ......|.|    :.:|..|....|..  ||.||:  |.|   |::..||..|.::
Zfish   486 -TDVPSDCKE----LTVDEPPQTCWTSC--CGYPKL--VTQ---VHVIRADGLKALD 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 108/357 (30%)
Calpain_III 346..483 CDD:238132 39/149 (26%)
FRQ1 <567..648 CDD:227455
capn5aNP_001073476.1 Peptidase_C2 27..341 CDD:279042 106/339 (31%)
Calpain_III 354..490 CDD:279416 41/156 (26%)
C2_Calpain 512..637 CDD:176011 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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