DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and capn11

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_031757539.1 Gene:capn11 / 541454 XenbaseID:XB-GENE-940593 Length:713 Species:Xenopus tropicalis


Alignment Length:698 Identity:215/698 - (30%)
Similarity:342/698 - (48%) Gaps:84/698 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFT-----FQWKRIMDLADSGSGAVAANSSAA 64
            ||.:...||....|:|||:||.:.||:.:.:..|.|     .||||..|:||.            
 Frog    35 YESLKQQCRESGSLFEDPNFPPIGSSLGFKELGPGTSKTKGVQWKRPHDIADD------------ 87

  Fly    65 PVFL-NESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEW 127
            |.|: ..:...|:..|.:||.||::.:|.|:...:|.:||||..|.....: |:|.|::|..|||
 Frog    88 PQFIVGGATRTDICQGALGDCWLLAAIGSLTLNEDLLHRVVPHGQGFQDDYAGIFHFQIWQFGEW 152

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGV--- 189
            |:|::|||||..:|.|.|:.....:.||:||||||.|||:||||||..|:.::|..|..|||   
 Frog   153 VDVVIDDRLPVKDGELVFVHSAECSEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEM 217

  Fly   190 --VRQMPILSDNIRPQTLK--ELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLD 250
              :|:.|...|.|..:.|.  .||..:..:|...|..|...||         ::....|.:::|.
 Frog   218 YELRKAPRNLDKIIKRALDRGSLLGCSIDITSAFDMEAVTFKK---------LVKGHAYSVTALR 273

  Fly   251 KVKTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSF 315
            :| ..||...:|:.:::     |:|: ..:.|.||..|..|..|...|:..|..::..||||:||
 Frog   274 EV-NYMGGVEKLIRIRN-----PWGQ-VEWTGAWSDNSSEWNEVDPSEQEDLQLKMEDGEFWMSF 331

  Fly   316 CDFVEIFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNH-ESFHINPQLL 379
            .:|:..||.:|:..|..:..:.:...|     |...::.|.|:||.|||||||: .:|.||||..
 Frog   332 QEFLRQFSRLEICNLTPDALDKDGQSK-----WHSTLYDGTWRRGSTAGGCRNNPATFWINPQFK 391

  Fly   380 ISVQDEQD-----------LVIALNQHTAVEPKV------IGFTMYTWDGEYMLSEC----LQKD 423
            :::.:|.|           ||..:.::...|.||      |||.:|....|:  ..|    |:||
 Frog   392 VTLLEEDDDPDDNELACSFLVALMQKNRRKERKVGQDMHTIGFAVYEVPDEF--RGCQNVHLKKD 454

  Fly   424 FFKNHVSYLNSD-YGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQT 487
            ||..|.|...|: :.|.|.||....|..|.|:::|:|:||.:||.|.:||.......:..|:.:.
 Frog   455 FFLRHQSCARSETFINLREVSTQIRLPPGEYIIVPSTFEPHKEADFVLRIFTEKHSDIQELDEEV 519

  Fly   488 MILLDPFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCFELHELLEACLP--NDYIKG 550
            ...|.....|...|.:.          .::.::.|||.|:..|:.|||..:|...:.  .|....
 Frog   520 SADLPEEEELTEDDVDD----------SFKAMFRQLAGEDMEISVFELKTILNRVVAKHKDLKTD 574

  Fly   551 CANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKAGILRAERLRDALCDIG 615
            ...::.|||::.|.|:.|||::...:|:.....::.|...|:.:..:|:|.:.|..||.||...|
 Frog   575 GFGMEACRQMVNLMDKDGSGKLGVVEFQILWNKIRQWLTAFRQHDLDKSGTISAYELRIALEGTG 639

  Fly   616 FQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNYGQ 663
            ::|:..::..|:.||...|..:...:||..::.|...|..|...:.|:
 Frog   640 YKLNNKLIQVLVARYADSDMGIDFDNFVCCLVKLEAMFRFFKALDQGE 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 113/335 (34%)
Calpain_III 346..483 CDD:238132 54/159 (34%)
FRQ1 <567..648 CDD:227455 21/80 (26%)
capn11XP_031757539.1 Peptidase_C2 49..345 CDD:395523 110/323 (34%)
Calpain_III 358..515 CDD:238132 55/163 (34%)
EFh_PEF 537..696 CDD:355382 40/151 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.