DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and gca

DIOPT Version :10

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001005585.1 Gene:gca / 449543 ZFINID:ZDB-GENE-040930-3 Length:205 Species:Danio rerio


Alignment Length:147 Identity:36/147 - (24%)
Similarity:75/147 - (51%) Gaps:4/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 ELLEACLPNDYIKGC---ANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEK 598
            |.|:.||....|.|.   .:::.||.:|||.||..:|::.|.:||.....|..|:..|.|..::.
Zfish    59 EELQRCLTQTGISGSYTPFSLETCRIMIALLDRDYTGKMGFNEFKELFGVLNGWKQNFMMVDRDH 123

  Fly   599 AGILRAERLRDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNYGQ 663
            :|.:....:..::.::|:::|..:::.:::||.| .|.:...|:|:..:.|....:.|..::..|
Zfish   124 SGTVEPYEMSQSIANMGYRVSPRVLDAIVKRYSR-SGKIYFDDYVACCVKLKALTDHFRRRDTMQ 187

  Fly   664 VNVIEVHLHDWIKSILS 680
            ..::.....|:|...:|
Zfish   188 QGMVNFQYDDFILCTIS 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004
Calpain_III 346..483 CDD:238132
EFh_PEF 515..680 CDD:355382 35/145 (24%)
EF-hand motif 515..543 CDD:320054 2/5 (40%)
EF-hand motif 556..585 CDD:320054 11/28 (39%)
EF-hand motif 586..615 CDD:320054 4/28 (14%)
EF-hand motif 622..650 CDD:320054 6/27 (22%)
EF-hand motif 652..680 CDD:320054 4/27 (15%)
gcaNP_001005585.1 EFh_PEF_grancalcin 41..205 CDD:320061 36/147 (24%)
EF-hand motif 41..69 CDD:320061 4/9 (44%)
EF-hand motif 81..110 CDD:320061 11/28 (39%)
EF-hand motif 111..141 CDD:320061 4/29 (14%)
EF-hand motif 147..174 CDD:320061 6/27 (22%)
EF-hand motif 175..205 CDD:320061 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.

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