DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and sol

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster


Alignment Length:609 Identity:135/609 - (22%)
Similarity:221/609 - (36%) Gaps:183/609 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKYERILSDCRSKNVLWEDPDFPAVQSSVFYY------QTPPFTFQWKRIMDL-ADSGSGAVAAN 60
            :|::.|:..||..:.|:.|..||....|::|.      :..| ..||:|..:: .|.|       
  Fly   999 TKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNP-VVQWRRPHEINCDGG------- 1055

  Fly    61 SSAAP---VFLNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRLW 122
              |.|   || ......|:..|.:|:.||:|.|.:|:...:|...|:...:  ....|.::.||.
  Fly  1056 --AYPPWAVF-RTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKE--ICGQGAYQVRLC 1115

  Fly   123 WCGEWVEVLVDDRLP-TINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLL 186
            ..|:|..|||||.|| ...|.|.:.|.:... .|..|:|||:||:||.||||..|...:||..|.
  Fly  1116 KDGKWTTVLVDDLLPCDKRGHLVYSQAKRKQ-LWVPLIEKAVAKIHGCYEALVSGRAIEGLATLT 1179

  Fly   187 GGVVRQMPILSDNI---------RPQTLKELLTTTCIVTCL-ADKSATVAKKNLAERMPNGILVN 241
            |.....:|:.:.::         :.....:||::.|:...: |.......|.:..|....|:  .
  Fly  1180 GAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGL--R 1242

  Fly   242 VNYRLSSLDKVKTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQL 306
            ..:..|.|| ||.:.|.  :|:.|::     |:|..: :.||||..|..|  ...:..|.:....
  Fly  1243 PRHAYSVLD-VKDIQGH--RLLKLRN-----PWGHYS-WRGDWSDDSSLW--TDDLRDALMPHGA 1296

  Fly   307 GPGEFWLSFCDFVEIFSTMEV----------------------------VYLDTETS-------- 335
            ..|.||:||.|.:..|..:::                            |...||..        
  Fly  1297 SEGVFWISFEDVLNYFDCIDICKVRSGWNEVRLQGTLQPLCSISCVLLTVLEPTEAEFTLFQEGQ 1361

  Fly   336 -NDEEMLKSR---------------PLHWKMKMHQGQWKRGVTAGGCR---------------NH 369
             |.|:..:|:               |...::..|..:..||..  ||.               ||
  Fly  1362 RNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVEHSKRQVRGFV--GCHKMLERDIYLLVCLAFNH 1424

  Fly   370 -----ESFHINPQLLISVQDEQ---------------DLVIAL-----NQHTAVEPKVIGFTMY- 408
                 |..|..||.::::...:               |.:|:|     .:|...|    |.|.| 
  Fly  1425 WHTGIEDPHQYPQCILAIHSSKRLLVEQISPSPHLLADAIISLTLTKGQRHEGRE----GMTAYY 1485

  Fly   409 ---TWDGEYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAG---HYVLIPTTYE------ 461
               .|.|..::.|                    .||.:...|::..   .|.::.|..|      
  Fly  1486 LTKGWAGLVVMVE--------------------NRHENKWIHVKCDCQESYNVVSTRGELKTVDS 1530

  Fly   462 --PAEEAHFTV--RILGTGSFRLS 481
              |.:.....|  ::.|:|.|.::
  Fly  1531 VPPLQRQVIIVLTQLEGSGGFSIA 1554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 94/370 (25%)
Calpain_III 346..483 CDD:238132 33/193 (17%)
FRQ1 <567..648 CDD:227455
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 94/353 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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