DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn13

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001020304.1 Gene:Capn13 / 362701 RGDID:1562682 Length:668 Species:Rattus norvegicus


Alignment Length:721 Identity:194/721 - (26%)
Similarity:307/721 - (42%) Gaps:124/721 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RILSD-CRSKNVLWEDPDFPAVQSSV-----FYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAP 65
            |.|.| |.|:..|:.|..|||..||:     ...:.|  ..:|||..||           |...|
  Rat    22 RFLRDRCLSRGQLFIDDTFPAEASSIGQKLLMGKRLP--KLEWKRPQDL-----------SFGPP 73

  Fly    66 VFLNESA-EFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRLWWCGEWVE 129
            .|:.|.| .||:..|:.||.|.::.||.|:.......:::..........|:|.||.|.||:|||
  Rat    74 HFILEGASRFDIQQGRAGDCWFLAALGSLTQNPQCLQKILMNQSFSYQYAGIFHFRFWQCGQWVE 138

  Fly   130 VLVDDRLPTINGRLAFMQPQASNC-FWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQM 193
            |::|||||.:.....|:.|:..|. ||..|:|||.|||.|||..|.||...|.|.||.||||.::
  Rat   139 VVIDDRLPVVGNNFCFVHPRRGNQEFWPCLMEKAYAKLLGSYSQLHYGYLPDALVDLTGGVVTRI 203

  Fly   194 PILSDNIRPQTL----KELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKT 254
            .:.|.   |..|    |..:.|..:|.|...|..|    ..:|.|.||::....|.::..:|::.
  Rat   204 NLHSS---PSDLLMVVKTAVQTGSMVACATPKWLT----EESEVMENGLVSQHAYTVTGAEKIQY 261

  Fly   255 LMG--DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSFCD 317
            ..|  :.::|        ..|:| .|.:.|.|...|:.|.......:::|......||||:|..|
  Rat   262 RRGWEEIIRL--------WNPWG-NTEWRGRWGDGSQEWWETHGSRKSQLYENKDDGEFWMSCRD 317

  Fly   318 FVEIFSTMEV-----VYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNHESFHINPQ 377
            |.|.||.:.:     :.:|...:.:|.        |:....:.|...|.||||...      :.|
  Rat   318 FHENFSCLYICSQFPITMDPGVTPNES--------WRQMRFKNQVISGNTAGGDGR------DIQ 368

  Fly   378 LLISVQDEQD---LVIA---LNQHTAVE--PKVIGFTMYTWDGEYM-LSECLQKDFFKNHVSYLN 433
            .|..||:..|   :::|   :.|....|  |..:.|.::..|.::. ..:.|...||........
  Rat   369 YLFDVQEPMDGNNVIVAFTVMPQSLKTEEWPFPLQFQVFKVDSQFQKFQKRLPPAFFSQFRDAAQ 433

  Fly   434 S-DYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRIL---------GTGSFRLSCLETQTM 488
            . ||...|:.:...||..|.||::.:.:  .:|..|.:||.         ...||.|.       
  Rat   434 GIDYVTKRNFTKSFHLSPGTYVVVASAH--GKEVEFLLRIFLKMPHKDRNPNSSFNLK------- 489

  Fly   489 ILLDPFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCFELHELLEACLPNDYIKG--- 550
                   |||.:.:|. ..||..        :.:..|:...|:..:|..||.    .:|:.|   
  Rat   490 -------ALKGSLSEN-ESPKSS--------FHRYMDQGLDIDASQLQSLLN----QEYLTGPPG 534

  Fly   551 -CANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKAGILRAERLRDAL--C 612
             ..::|.|:.::||.|...:||:..::|......|...|.||: :.:...|:||:..|.:.:  .
  Rat   535 DTFSLDQCQSIMALMDLKVNGRLDREEFARLQSRLIHCQHVFQ-HIQRSQGVLRSSDLWEVIEST 598

  Fly   613 DI--GFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQF-HLKNYGQ-VNVIEVHLHD 673
            |.  |..||.::::.:..||....|.|.....|..:|.|.|....| :|...|: :.:.|:   :
  Rat   599 DFLSGVLLSKELLSLMTLRYSDSSGRLSFPSLVCFLIRLETMSKAFRNLSKDGKSIYLTEM---E 660

  Fly   674 WIKSIL 679
            |:|.::
  Rat   661 WMKLVM 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 109/340 (32%)
Calpain_III 346..483 CDD:238132 36/155 (23%)
FRQ1 <567..648 CDD:227455 20/84 (24%)
Capn13NP_001020304.1 Peptidase_C2 35..329 CDD:279042 103/322 (32%)
Calpain_III 345..477 CDD:294111 33/139 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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