DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and capn8

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001231009.1 Gene:capn8 / 337730 ZFINID:ZDB-GENE-050522-279 Length:701 Species:Danio rerio


Alignment Length:726 Identity:209/726 - (28%)
Similarity:349/726 - (48%) Gaps:106/726 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTF-----QWKRIMDLADSGSGAVAANSSAA 64
            |:.:..:|.:|..|:.||.|||...|:.|.:...::|     ||||..:|..:            
Zfish    32 YQSLKQECLAKRALFCDPTFPAESDSLGYNELGRYSFKTKGVQWKRPKELCSN------------ 84

  Fly    65 PVFLNESA-EFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEW 127
            |.|:.:.| ..|:..|.:||.||::.:..|:..:.:..||||:.|:....: |:|.|:.|..|||
Zfish    85 PEFIMDGANRTDICQGALGDCWLLAAIASLTLDKEILERVVPSGQSFTEDYAGIFHFQFWQYGEW 149

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQ 192
            |:|::||||||.:|:|.|:.....:.||:||||||.||::||||||..|:.::|..|..||:...
Zfish   150 VDVVIDDRLPTRDGKLLFVHSAEGSEFWSALLEKAYAKVNGSYEALTGGSTTEGFEDFTGGITEN 214

  Fly   193 MPILSDNIRPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVN-YRLSSLDKVKTLM 256
            ..:   :..|..|.:|:.....:..|...|..:......|.:.:..||..: |.:::.::|. ..
Zfish   215 YEL---SKAPPNLFKLVQKALALGSLLGCSIDITNSYETEAVTSLKLVKGHAYSVTAAEEVH-FR 275

  Fly   257 GDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSFCDFVEI 321
            |..||||.:::     |:|| ..:.|.||..||.|:.|...|:|:|......||||:::.||::.
Zfish   276 GSLVQLVRIRN-----PWGE-VEWTGAWSDNSKEWDSVRPEEKAKLDYSAEDGEFWMAYSDFIQQ 334

  Fly   322 FSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNH-ESFHINPQLLISVQDE 385
            ||.:|:..|..:|.:.||:.:     |.....:|.|:.|.|||||||: .:|..|||.:|.:::.
Zfish   335 FSKLEICNLTPDTLSSEEVNR-----WSYSQFEGNWRVGSTAGGCRNNPATFCSNPQFMIKLEEI 394

  Fly   386 QD----------LVIALNQHTAVEPK-------VIGFTMYTWDGEY--MLSECLQKDFFKNHVSY 431
            .|          .::.|.|....:.|       .|||.:|....|.  ..:..|..|......|.
Zfish   395 DDDPHDGVNGCTFLVGLIQKDGRKDKRFGRDLNTIGFAIYKVPDELKGRSNIHLGPDVLLRQRSV 459

  Fly   432 LNSD-YGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQTMILLDPFP 495
            ..|: :.|.|.||....|..|.|::||:|:||..:..|.:|:.                      
Zfish   460 AGSNTFINLREVSERFKLPPGEYIIIPSTFEPHRKGSFILRVF---------------------- 502

  Fly   496 ALKSTDAERCGGPKVKSVCQ-----------YEPVYMQLADENKTINCFELHELLEACLPNDYIK 549
            |.|..||.:.|......|.:           ::.::.|:|..:..::..||.::|...:.    |
Zfish   503 AEKEADASQIGTEISADVKKHFISEKDIDPHFKRLFSQVAGSDSEVSVLELQQILNTVVS----K 563

  Fly   550 GCANI-------DICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKAGILRAERL 607
            ..:|:       :.||.:|:|.|:.|||::...:|.|..:.::.:..:||....:.:|.:.:..:
Zfish   564 RKSNVKTDGFSLETCRHIISLLDKDGSGKLGLLEFHTLWMKIQKYLEIFKHRDTDNSGTMSSLEM 628

  Fly   608 RDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHL---KNYGQVNVIEV 669
            |||:.:.||||:.|::..||.||..::..:....|||.:|.|...|..|.|   ||.|:   ||:
Zfish   629 RDAVKEAGFQLNNDVLEVLIARYANQEYAIDFDSFVSCLIRLELLFKMFQLFDKKNTGK---IEL 690

  Fly   670 HLHDWIKSILS 680
            .:..|:...||
Zfish   691 DILQWLCLALS 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 107/329 (33%)
Calpain_III 346..483 CDD:238132 43/157 (27%)
FRQ1 <567..648 CDD:227455 23/80 (29%)
capn8NP_001231009.1 Peptidase_C2 46..342 CDD:279042 104/317 (33%)
Calpain_III 356..507 CDD:279416 45/172 (26%)
EFh 578..633 CDD:238008 16/54 (30%)
EFh 607..691 CDD:298682 28/86 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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