DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn7

DIOPT Version :10

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001025208.1 Gene:Capn7 / 306260 RGDID:1304855 Length:813 Species:Rattus norvegicus


Alignment Length:591 Identity:119/591 - (20%)
Similarity:218/591 - (36%) Gaps:142/591 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TF-QWKRIMDLADSGSGAVAANSSAAPVFLNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYR- 102
            || :|.|..||.::            |..:...:.|.:....:.|...|:.|.:.::....|.: 
  Rat   257 TFSKWVRPEDLTNN------------PTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKK 309

  Fly   103 -----VVPADQTLASAH---GVFRFRLWWCGEWVEVLVDDRLPTIN-GRLAFMQPQASNCFWAAL 158
                 :.|.::.....:   |.:..:|...|...:|::||:||..: |.|........:..|.:|
  Rat   310 LITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSL 374

  Fly   159 LEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILSDNIRPQTLK---------------EL 208
            :|||..|:.|.|:.....:..| |..|.|.:..::.:.||:   ||..               ::
  Rat   375 IEKAYMKVMGGYDFPGSNSNID-LHALTGWIPERIAMHSDS---QTFSKDSSFRMLYQRFHKGDV 435

  Fly   209 LTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGDSVQLVCLKDTFS--- 270
            |.|           |:......||....|::....|.:..:.:.|.|     :.:.||:.:|   
  Rat   436 LIT-----------ASTGMMTEAEGEKWGLVPTHAYAVLDIREFKGL-----RFIQLKNPWSHLR 484

  Fly   271 -SKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSFCDFVEIFSTMEVVYLDTET 334
             ...:.|..  :.:|:|..:.:....    .|..:::..|.||:|:.|..:.:   :||||   :
  Rat   485 WKGRYSEND--VKNWTPELQKYLNFD----PRTAQKIDNGIFWISWDDLCQYY---DVVYL---S 537

  Fly   335 SNDEEMLKSRPLH--WKMKMHQGQWKRGVTAGGCRNHESFHINPQLLISVQDEQD---LVIALNQ 394
            .|.....:|..:|  |..|.           |..::..|...|||..:.||..|.   :.:.|::
  Rat   538 WNPALFKESTCIHSTWDAKQ-----------GPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSR 591

  Fly   395 HT------AVEPKVIGFTMYTWDGEYMLSECLQKDFF-KNHVSYLNSDYGNTRHVSYHTHLE--- 449
            |.      |...:.|...:|..||        :|.:: .:...|::....|:.|  |.|.::   
  Rat   592 HITDKDDFANNREFITMVVYKTDG--------KKVYYPADPAPYIDGIRINSPH--YLTKIKLTT 646

  Fly   450 -AGH-YVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQTMILLDPFPALK-------STDAERC 505
             ..| :.|:.:.||.....|:|||:....||..|.:.:       |:...|       ...|..|
  Rat   647 PGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPS-------PYTLSKRINGKWSGQSAGGC 704

  Fly   506 GGPKVKSVCQYEPVYMQLADENKTINCFELHELLEACLPNDYIKGCANIDICRQVIALQDRSGSG 570
            |  ..:...:..|:|....|:...:       |:|...|..|..|.       :|:|:......|
  Rat   705 G--NFQETHKNNPIYQFHIDKTGPL-------LIELRGPRQYSVGF-------EVVAVSIAGDPG 753

  Fly   571 RITFQQ 576
            ...||:
  Rat   754 PHGFQR 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 61/318 (19%)
Calpain_III 346..483 CDD:238132 35/153 (23%)
EFh_PEF 515..680 CDD:355382 13/62 (21%)
EF-hand motif 515..543 CDD:320054 5/27 (19%)
EF-hand motif 556..585 CDD:320054 5/21 (24%)
EF-hand motif 586..615 CDD:320054
EF-hand motif 622..650 CDD:320054
EF-hand motif 652..680 CDD:320054
Capn7NP_001025208.1 MIT_calpain7_1 5..76 CDD:239144
MIT 85..157 CDD:469712
CysPc 214..538 CDD:238004 64/324 (20%)
calpain_III 687..810 CDD:214786 17/89 (19%)
Blue background indicates that the domain is not in the aligned region.

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