DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and clp-9

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001256150.1 Gene:clp-9 / 266916 WormBaseID:WBGene00011705 Length:718 Species:Caenorhabditis elegans


Alignment Length:662 Identity:139/662 - (20%)
Similarity:240/662 - (36%) Gaps:193/662 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDF----------PAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAA 59
            |..|:|.|:|.|..:.|..|          ...::.|..::.|.| ..|.|       .|.....
 Worm   123 YSNIISYCKSSNSPFIDDSFLHNKKSIGSLQFTKNGVKRHEEPDF-LNWLR-------PSQMFTK 179

  Fly    60 NSSAAP-VFLNESAEFDVVPGKM-GDRWLVSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRLW 122
            :..::| ..||.....|:..|.: ||.||:|.:.|::...::...::|..|  .|.:||::.:|.
 Worm   180 DGRSSPWSVLNNPRPSDIEQGTLVGDCWLMSAMALIAERPDVLDDIIPKKQ--YSHYGVYQIKLC 242

  Fly   123 WCGEWVEVLVDDRLPTINGRLAF-MQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLL 186
            ..|:|..::|||..|..:...:. |.....|..|..|:|||:||:.|||..|...:.:.||:.|.
 Worm   243 VEGKWEVIIVDDFFPCYSKTNSIAMAVGRRNQLWVPLIEKAMAKVLGSYSKLHGASLAQGLSMLT 307

  Fly   187 GG--VVRQMPILSDNIRPQTLKELLT----------TTCIVTCLADKSATVAKKNLAERMPNGIL 239
            |.  |....|.:     |.::.::.|          :..::.|.......|..:  ||....|:|
 Worm   308 GASCVNYNCPPI-----PSSVDDVDTFWAQLVSSKESGFLMCCHCGAFENVVAE--AEFKAMGLL 365

  Fly   240 VNVNYRLSSLDKVKTLMGDSVQLVCLKDTFSSKPFGEKTHFL--GDWSPMSKTWERVSQVERARL 302
            .|..|  |.||   .:.....:|:.:::     |:|:   |:  |.||.....|. :...::...
 Worm   366 TNHAY--SILD---VIYEQGYRLLRIRN-----PWGQ---FVWNGKWSDGWPGWP-IGMKQKFLN 416

  Fly   303 IRQLGPGEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCR 367
            .|:...|.||:...|||..|:::.|.                    |::|...:.:.....||  
 Worm   417 QRKDETGAFWMDLEDFVARFASVTVC--------------------KLRMDWSELRVTHKVGG-- 459

  Fly   368 NHESFHINPQLLISVQDE-------------------QDLVIALNQHTAVEPKVIG--------- 404
                 |.:..|.|.:.|.                   .||::.:  |.....:.||         
 Worm   460 -----HSDTALQIVITDTCEVSVTAFQKGAFNKKDNLNDLMVCV--HRISGDRRIGELIEMSSRI 517

  Fly   405 ----FTM---YTWDGEYMLSECLQKDFFKNHVSYLN-------SDYGNTRHVSYHTHLEAGHYVL 455
                ||:   :...|||.:....|.....|....:|       ..:|....:|..|.:|:.|:|:
 Worm   518 SDNHFTIDEFFLAPGEYQIVCHSQSSLLTNKKGVVNMVVHTRYPIFGEYIPMSPRTRMESLHHVI 582

  Fly   456 IPTTYEPAEEAHF--------TVRILGTGSFRLSCLETQTMILLDPFPALKSTDAERCGGPKVKS 512
            |       :|...        .:|.| |..||       .||::          |:.|       
 Worm   583 I-------KEGDIVKNTNDGVVIRTL-TRKFR-------GMIIM----------ADNC------- 615

  Fly   513 VCQYEPVYMQL-ADENKTINCFELHELLEACLPNDYIKGCANIDI----CRQVIALQ---DRSGS 569
               .|..|:.: .|.::::|.......|:.            :|:    ||||:.:.   |.|..
 Worm   616 ---LEKKYLHVGVDCSQSMNIQSSRGFLQV------------VDVVPPLCRQVLLVLSTIDDSAQ 665

  Fly   570 GRITFQQFKTFM 581
            .|:: ...||.:
 Worm   666 YRVS-NSLKTLV 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 85/348 (24%)
Calpain_III 346..483 CDD:238132 34/186 (18%)
FRQ1 <567..648 CDD:227455 4/15 (27%)
clp-9NP_001256150.1 CysPc 123..453 CDD:128526 88/380 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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