DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and clp-10

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001367887.1 Gene:clp-10 / 189220 WormBaseID:WBGene00021041 Length:476 Species:Caenorhabditis elegans


Alignment Length:427 Identity:93/427 - (21%)
Similarity:164/427 - (38%) Gaps:119/427 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LGLLSSLRNLFYRVVPADQTLASAHGVFRFRLWWCGEWVEVLVDDRLPTI-NGRLAFMQPQASNC 153
            :.|::....:...::|..|  .|.|||::.::...|:|..::|||..|.. |.....:.....|.
 Worm     1 MALIAEKPEVLDAIIPKKQ--YSKHGVYQVKVCVEGKWEVIIVDDFFPCYRNTNSIAIAVGRRNQ 63

  Fly   154 FWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILSDNIR---PQTLK--------- 206
            .|..|:|||:||:.|||..|...:.:.||:.|.|         :..:|   |||||         
 Worm    64 LWVPLIEKAMAKVLGSYSKLHGASLARGLSMLTG---------ASCVRYKCPQTLKIDEEVDTFW 119

  Fly   207 -ELLTT--TCIVTC-----LADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGDSVQLV 263
             :|:::  :..:||     ...:.|....|.|      |::.:..|  |.||.|..   ...:|:
 Worm   120 AQLVSSQESGFLTCCHCGPFESEEAEAEFKAL------GLVTSHAY--SILDVVHE---QGHRLL 173

  Fly   264 CLKDTFSSKPFGEKTHFL--GDWSPMSKTWERVSQVERARLIRQLG-PGEFWLSFCDFVEIFSTM 325
            .:::     |:|:   |:  |.||.....|.  ..::||.|.::.. .|.||:...|||:.|:::
 Worm   174 RIRN-----PWGQ---FVWNGKWSDGWLEWP--IDMKRALLDKRSDETGAFWMDLQDFVKRFASV 228

  Fly   326 EVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNHESFHINPQLLISVQDEQDLVI 390
            .|.                    |::|...:.:.....|.       |.:..|.|.:.::     
 Worm   229 TVC--------------------KLRMDWSELRATQEVGR-------HADSALQIVITEQ----- 261

  Fly   391 ALNQHTAVEPKVIGFTMYTWDGEYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHY-V 454
                  ..|..|..|...::..|..|::.:                     |..|...|.|.. .
 Worm   262 ------LCEVSVTAFQKGSFSKEDNLTDLM---------------------VCVHKISEDGRIGE 299

  Fly   455 LIPTTYEPAEEAHFTVR--ILGTGSFRLSCLETQTMI 489
            ||..:||.|:. |||:.  .|..|.:::.|....:::
 Worm   300 LIKMSYEIADN-HFTIDEFFLPRGVYQVVCHSPHSLV 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 67/262 (26%)
Calpain_III 346..483 CDD:238132 25/139 (18%)
FRQ1 <567..648 CDD:227455
clp-10NP_001367887.1 CysPc <1..241 CDD:412132 69/291 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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