DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and clp-2

DIOPT Version :10

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_497964.1 Gene:clp-2 / 175618 WormBaseID:WBGene00000543 Length:805 Species:Caenorhabditis elegans


Alignment Length:582 Identity:112/582 - (19%)
Similarity:214/582 - (36%) Gaps:140/582 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 WKRIMDLADSGSGAVAANSSAAPVFLNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYR----- 102
            |||:.:|.::            |..:.......:....:.|...:|.|.:.:.....|.:     
 Worm   266 WKRVSELFEN------------PTIIFSIDCHTIKQTVISDCSFISSLSIAALYEKRFKKQLVTS 318

  Fly   103 -VVPAD---QTLASAHGVFRFRLWWCGEWVEVLVDDRLPT-INGRLAFMQPQASNCFWAALLEKA 162
             :.|.|   :.:.:..|.:.|:....|.|.:||:||..|. .|.|:...|.:.....|.:|||||
 Worm   319 IIFPQDANGKPIYNPAGKYMFKFHLNGAWRKVLIDDYFPVDENNRMMCSQTENKGELWVSLLEKA 383

  Fly   163 IAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILSDNIR---PQTLKELLTT----TCIVTCLAD 220
            ..|:.|.|:.  .|:.|:...:.|.|.:.:...|||..:   .:..::|...    .|::|....
 Worm   384 YMKVMGGYDF--PGSNSNIDLNALTGWIPERIELSDTSKADPDEVFRKLFDRFHRGDCLITLATG 446

  Fly   221 KSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGDSVQLVCLKDTFSSKPFGEKTH--FLGD 283
            |.....:|.      :|::....|.:..:..|:|     .:|:.:|:.:        ||  :.|:
 Worm   447 KMTEDMQKR------SGLVETHAYAVIDIRCVET-----KRLLKVKNPW--------THSRWKGN 492

  Fly   284 WSPMSK-TWERVSQVERA-----RLIRQLGPGEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLK 342
            :|...| .|  .::::.|     .:..:...|.||:   |:..:....:|:|::...  |....|
 Worm   493 FSDKDKVNW--TAKMKNALAFDPEVAAEKDDGIFWI---DYESVRHFFDVIYVNWNA--DLFPFK 550

  Fly   343 SRPLHWKMKMHQGQWKRGVTAGGCRNHESFHINPQLLISVQDEQDLV---IALNQH-TAVEPKVI 403
            |        ::...|.:  ..|..|:..:...|||..::|...|...   |.|.:| ||::...:
 Worm   551 S--------VYHATWTQ--DTGPIRDVYTVGENPQYTLTVNLNQKAAAVWILLTRHITAIDDFAV 605

  Fly   404 GFTMYTWDGEYMLSECLQKDFFK------------NHVSYL----NSDYGNTRHVSYHTHLEAGH 452
            .....|    .::.|..||.:..            |...||    |...|.|:            
 Worm   606 NKEFIT----LIVYETGQKIYIPSNPQPISDGVRINSPLYLCQLSNKKPGITK------------ 654

  Fly   453 YVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQTMILLDPFPALKSTDAERCGGPKVKSVCQYE 517
            |.|:...||.....::::|:..|...:|..::.       |:...|:|.....|..|      |.
 Worm   655 YTLVVAQYEKTNTINYSLRVFSTTDVKLEPVQL-------PYSISKTTRGNWDGSDK------YP 706

  Fly   518 PVYMQLADENKTINCFELHELLEACLPNDYIKGCANIDICRQVIALQDRSGSGRITFQQFKT 579
            .:.:.|..::..|..|     :|...|..:   |..:::        .::.|.|..|.:.|:
 Worm   707 IMKLTLHSKSDEIALF-----MELKAPKQF---CVALEM--------KQNSSDRTVFLETKS 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 62/310 (20%)
Calpain_III 346..483 CDD:238132 30/156 (19%)
EFh_PEF 515..680 CDD:355382 11/65 (17%)
EF-hand motif 515..543 CDD:320054 5/27 (19%)
EF-hand motif 556..585 CDD:320054 4/24 (17%)
EF-hand motif 586..615 CDD:320054
EF-hand motif 622..650 CDD:320054
EF-hand motif 652..680 CDD:320054
clp-2NP_497964.1 MIT 4..75 CDD:239121
CysPc 227..551 CDD:128526 64/324 (20%)
Calpain_III <722..801 CDD:469636 8/47 (17%)
Blue background indicates that the domain is not in the aligned region.

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