DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn5

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_604456.2 Gene:Capn5 / 171495 RGDID:620084 Length:640 Species:Rattus norvegicus


Alignment Length:647 Identity:176/647 - (27%)
Similarity:284/647 - (43%) Gaps:125/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69
            |..:...|..:.||:|||.|||...|::|..||..|.:|||..|:.|.           ..:|::
  Rat    13 YSALKRACLRRKVLFEDPHFPATDDSLYYKGTPGPTVRWKRPKDICDD-----------PRLFVD 66

  Fly    70 ESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVP-------ADQTLASAHGVFRFRLWWCGEW 127
            ..:..|:..|::|:.|.|:....|:|..:|:.:|:|       ..:...|..|:|.|..|..|||
  Rat    67 GISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEW 131

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQ 192
            |:|:|||||||:|.:|.:....:.|.||.||:|||.|||.|.|:||..|..:|.|.|..|||...
  Rat   132 VDVVVDDRLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEP 196

  Fly   193 MPILSDNI------RPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDK 251
            :.:...::      |.|..:.:|........::.....:...::..|:..|::....|.::.:.|
  Rat   197 IDLTEGDLATDEAKRSQLFERVLKVHSRGGLISASIKAMTAADMETRLACGLVKGHAYAVTDVRK 261

  Fly   252 VKTLMG-------DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARL-IRQLGP 308
            |:...|       :.:.::.|::     |:||: .:.|.||..|:.|::||:.||.:: :.....
  Rat   262 VRLGHGLLAFFKSEKLDMIRLRN-----PWGER-EWTGPWSDTSEEWQKVSKSEREKMGVTVQDD 320

  Fly   309 GEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLH---------WKMKMHQGQWKRGV--- 361
            ||||::|.|....|:               :::|.|.::         |:....:|.|.|..   
  Rat   321 GEFWMTFEDMCRYFT---------------DIIKCRLINTSYLSIHKTWEEARLRGAWTRHEDPQ 370

  Fly   362 --TAGGCRNH-ESFHINPQLLISV-QDEQDLVIALNQH----TAVEPK----VIGFTMYTWD--G 412
              .:|||.|| ::|..|||.:..| :.|.:::|.:.|.    |..|.|    .|||.:|..:  .
  Rat   371 QNRSGGCINHKDTFFQNPQYIFEVKKPEDEVLICIQQRPKRSTRREGKGENLAIGFDIYKVEENR 435

  Fly   413 EYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRIL---- 473
            :|.:.....|        ..:|.|.|:|.|...|.|..|.||:||||:||.....|.:|:.    
  Rat   436 QYRMHSLQHK--------AASSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVP 492

  Fly   474 -GTGSFRL-----SCLE---------TQTMILLDPFPALK--STDAE-----RCGGPKVKSVCQ- 515
             .....||     :|..         ||..:|  ....||  ||.|.     :|.|.||:|..| 
  Rat   493 SNCRELRLDEPPRTCWSSLCGYPQQVTQVHVL--GAAGLKDSSTGANSYVIIKCEGEKVRSAVQR 555

  Fly   516 ------YEP---VYMQLADENKTINCFELHELLEACLPNDYIKGCANIDICRQVIALQDRSG 568
                  |..   .|.:...:..|:..:....|.:..|...::|...:.......:.||||||
  Rat   556 GTSTPEYNVKGIFYRKKLSQPITVQVWNHRVLKDEFLGQVHLKTAPDDLQDLHSLHLQDRSG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 100/342 (29%)
Calpain_III 346..483 CDD:238132 46/172 (27%)
FRQ1 <567..648 CDD:227455 2/2 (100%)
Capn5NP_604456.2 Peptidase_C2 27..341 CDD:279042 98/345 (28%)
Domain III 344..496 44/159 (28%)
Calpain_III 354..493 CDD:279416 44/146 (30%)
C2_Calpain 515..638 CDD:176011 26/105 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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