DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn8

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_579843.2 Gene:Capn8 / 170808 RGDID:620085 Length:703 Species:Rattus norvegicus


Alignment Length:722 Identity:204/722 - (28%)
Similarity:347/722 - (48%) Gaps:90/722 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASKYERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFT-----FQWKRIMDLADSGSGAVAAN 60
            :...:|.:...|.:..||::||:|||..|::.|....|.:     ..|||..:|..:        
  Rat    28 LGQDFETLRKQCLNSGVLFKDPEFPACPSALGYKDLGPGSPDTQGIVWKRPTELCPN-------- 84

  Fly    61 SSAAPVFL-NESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWW 123
                |.|: ..:...|:..|.:||.||::.:..|:....|.|||:|.||:....: |:|.|:.|.
  Rat    85 ----PQFIVGGATRTDIRQGGLGDCWLLAAIASLTLNEKLLYRVLPRDQSFQKDYAGIFHFQFWQ 145

  Fly   124 CGEWVEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGG 188
            .||||||::||||||.||:|.|:..:..|.||:||||||.|||:||||||..|:..:|..|..||
  Rat   146 YGEWVEVVIDDRLPTKNGQLLFLHSEEGNEFWSALLEKAYAKLNGSYEALVGGSTIEGFEDFTGG 210

  Fly   189 V-----VRQMP-----ILSDNIRPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVN 243
            :     :::.|     |:...:|..:   ||..:..|:..|:..||..:|         ::....
  Rat   211 ISEFYDLKKPPENLYYIIQKALRKGS---LLGCSIDVSTAAEAEATTRQK---------LVKGHA 263

  Fly   244 YRLSSLDKVKTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGP 308
            |.::.:::| ...|...:|:.|::     |:|| ..:.|.||..:..|..:....:..|.::...
  Rat   264 YSVTGVEEV-NFHGRPEKLIRLRN-----PWGE-VEWSGAWSDNAPEWNYIDPRRKEELDKKAED 321

  Fly   309 GEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNHE-SF 372
            ||||:||.||::.:|.:|:..|..::.:.||:.|     |.:.:..|:|.||.|||||.|:. ::
  Rat   322 GEFWMSFSDFLKQYSRLEICNLSPDSLSSEEIHK-----WNLVLFNGRWTRGSTAGGCLNYPGTY 381

  Fly   373 HINPQLLI---SVQDEQD---------LVIALNQHTAVEPKVIGFTMYTWD-GEYMLSECLQ--- 421
            ..|||..|   .|.::|:         :::.|.|......|.||..|.:.. ..|.:.:.|:   
  Rat   382 WTNPQFKIHLDEVDEDQEEGTSEPCCTVLLGLMQKNRRRQKRIGQGMLSIGYAVYQIPKELESHT 446

  Fly   422 -----KDFF-KNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRL 480
                 :||| ....|..:|.|.|.|.||....|..|.|:::|:|:||.::..|.:|:.  ...:.
  Rat   447 DAHLGRDFFLGRQPSTCSSTYMNLREVSSRVRLPPGQYLVVPSTFEPFKDGDFCLRVF--SEKKA 509

  Fly   481 SCLETQTMILLDPF-PALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCFELHELLEACLP 544
            ..||....:...|. |..:..|.|   ...|:|      ::.:...::..|:..:|..:|...|.
  Rat   510 KALEIGDTVSGHPHEPHPRDMDEE---DEHVRS------LFEEFVGKDSEISANQLKRVLNEVLS 565

  Fly   545 --NDYIKGCANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKAGILRAERL 607
              .|......||:.||::|:|.|..|:|.:...:|||..:.::::..:|:.......|.:.|..:
  Rat   566 KRTDMKFDGFNINTCREMISLLDSDGTGSLGPMEFKTLWLKIRTYLEIFQEMDHNHVGTIEAHEM 630

  Fly   608 RDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNYGQVNVIEVHLH 672
            |.||...||.|:..:...:..||......:..:.||:.:|.|.|.|..|.|.:..|..::::.|.
  Rat   631 RTALKKAGFTLNNQVQQTIAMRYACSKLGVDFNGFVACMIRLETLFKLFRLLDKDQNGIVQLSLA 695

  Fly   673 DWIKSIL 679
            :|:..:|
  Rat   696 EWLCCVL 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 107/338 (32%)
Calpain_III 346..483 CDD:238132 44/159 (28%)
FRQ1 <567..648 CDD:227455 18/80 (23%)
Capn8NP_579843.2 Peptidase_C2 46..342 CDD:279042 104/326 (32%)
Domain III 355..512 45/163 (28%)
Calpain_III 356..509 CDD:279416 44/154 (29%)
Linker. /evidence=ECO:0000250 513..531 3/17 (18%)
Domain IV. /evidence=ECO:0000250 532..703 43/180 (24%)
EFh 580..635 CDD:238008 15/54 (28%)
PTZ00183 612..>692 CDD:185503 20/79 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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