DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn6

DIOPT Version :10

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_031629.3 Gene:Capn6 / 12338 MGIID:1100850 Length:641 Species:Mus musculus


Alignment Length:686 Identity:159/686 - (23%)
Similarity:281/686 - (40%) Gaps:180/686 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KYERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFL 68
            ||:.:..:|.....|:.||.|.....|:|:.:..|....|||..|::|.           ..:.:
Mouse    12 KYQELKQECMKDGRLFCDPTFLPENDSLFFNRLLPGKVVWKRPQDISDD-----------PHLIV 65

  Fly    69 NESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVP--ADQTL-----ASAHGVFRFRLWWCGE 126
            ...:...::.|::|::.::|....|:...:.:.:.:|  .||..     ....|:|.||.|..||
Mouse    66 GNISNHQLIQGRLGNKAMISAFSCLAVQESHWTKAIPNHKDQEWDPRKPEKYAGIFHFRFWHFGE 130

  Fly   127 WVEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVR 191
            |.||::||.||||||.|.|....:.|.||.||||||.|||.|.||||...|.:|.:.|..|.:..
Mouse   131 WTEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGLTITDIIMDFTGTLAE 195

  Fly   192 ----QMPILSDNIRPQ-----TLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLS 247
                |....:|.:..:     .|.:..|...::.|..:   :.:::........|:|....|.::
Mouse   196 IIDMQKGRYTDLVEEKYKLFGELYKTFTKGGLICCSIE---SPSQEEQEVETDWGLLKGYTYTMT 257

  Fly   248 SLDKVKTLMGDSVQLVCLKDTFSSK---------PFGEKTHFLGDWSPMSKTWERVSQVERARL- 302
            .:.|::  :|:.     |.:.||::         |.| :..:.|.||.:|:.|::::..:|..| 
Mouse   258 DIRKLR--LGER-----LVEVFSTEKLYMVRLRNPLG-RQEWSGPWSEISEEWQQLTVTDRKNLG 314

  Fly   303 IRQLGPGEFWLSFCDFVEIFSTMEV-------VYLDTETSN-------DEEMLKSRPLHWKMKMH 353
            :.....||||:|..||...|..:.|       |:...|..:       |::.|.:|         
Mouse   315 LVMSDDGEFWMSLEDFCHNFHKLNVCRNVNNPVFGRKELESVVGCWTVDDDPLMNR--------- 370

  Fly   354 QGQWKRGVTAGGC-RNHESFHINPQLLISV-QDEQDLVIALNQHT--------AVEPKVIGFTMY 408
                     :||| .|.::|..|||.:.:| :|...::::|.|..        ..:..:|||.::
Mouse   371 ---------SGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRMGRPDNYIIGFELF 426

  Fly   409 TWDGEYMLSECLQKDFFKNHVSYL-----NSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHF 468
            ..:        :.:.|..:|: |:     .|.|.:||.|....:|:.|.|||:||.::....:.|
Mouse   427 KVE--------MNRRFRLHHL-YIQERAGTSTYIDTRTVFLSKYLKKGSYVLVPTMFQHGRTSEF 482

  Fly   469 TVRI----------LGTGSFRLSC---------LETQTMI-------------LLDPFPALKSTD 501
            .:||          |.....::||         :.||..:             .::|:..:|   
Mouse   483 LLRIFSEVPVQLRELTLDMPKMSCWNLARGYPKVVTQITVHSAEGLEKKYANETVNPYLIIK--- 544

  Fly   502 AERCGGPKVKSVCQYE-------------------PVYMQLADENKTINCFELHELLEACLPNDY 547
               ||..:|:|..|..                   |:.:|:.:..|..:.|.....|:|. |:| 
Mouse   545 ---CGKEEVRSPVQKNTVHAIFDTQAIFYRRTTDIPIIIQVWNSRKFCDQFLGQVTLDAD-PSD- 604

  Fly   548 IKGCANIDICRQV--IALQDRSG------SGRITFQ 575
                     ||.:  :.|:.:.|      .|.|:|:
Mouse   605 ---------CRDLKSLYLRKKGGPTAKVKQGHISFK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 92/354 (26%)
Calpain_III 346..483 CDD:238132 36/170 (21%)
EFh_PEF 515..680 CDD:355382 16/88 (18%)
EF-hand motif 515..543 CDD:320054 7/46 (15%)
EF-hand motif 556..585 CDD:320054 7/28 (25%)
EF-hand motif 586..615 CDD:320054
EF-hand motif 622..650 CDD:320054
EF-hand motif 652..680 CDD:320054
Capn6NP_031629.3 CysPc 13..351 CDD:128526 94/359 (26%)
Domain III 344..495 38/177 (21%)
Calpain_III 349..497 CDD:238132 37/174 (21%)
C2_Calpain 514..639 CDD:176011 24/135 (18%)
Blue background indicates that the domain is not in the aligned region.

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