DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn5

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_006507338.1 Gene:Capn5 / 12337 MGIID:1100859 Length:653 Species:Mus musculus


Alignment Length:594 Identity:158/594 - (26%)
Similarity:258/594 - (43%) Gaps:135/594 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69
            |..:...|..|.||:|||.|||...|::|..||..|.:|||..|:.|.           ..:|::
Mouse    26 YSALKRACLRKKVLFEDPLFPATDDSLYYKGTPGPTVRWKRPKDICDD-----------PRLFVD 79

  Fly    70 ESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVP-------ADQTLASAHGVFRFRLWWCGEW 127
            ..:..|:..|::|:.|.|:....|:|..:|:.:|:|       ..:...|..|:|.|..|..|||
Mouse    80 GISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEW 144

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQ 192
            |:|:|||||||:|.:|.:....:.|.||.||:|||.|||.|.|:||..|..:|.|.|..|||...
Mouse   145 VDVIVDDRLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEP 209

  Fly   193 MPILSDNI------RPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDK 251
            :.:...::      |.|..:.:|........::.....|...::..|:..|::....|.::.:.|
Mouse   210 IDLTEGDLATDEAKRNQLFERVLKVHSRGGLISASIKAVTAADMEARLACGLVKGHAYAVTDVRK 274

  Fly   252 VKTLMG-------DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARL-IRQLGP 308
            |:...|       :.:.::.|::     |:||: .:.|.||..|:.|::||:.||.:: :.....
Mouse   275 VRLGHGLLAFFKSEKLDMIRLRN-----PWGER-EWTGPWSDTSEEWQKVSKSEREKMGVTVQDD 333

  Fly   309 GEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLH---------WKMKMHQGQWKRGV--- 361
            ||||::|.|....|:               :::|.|.::         |:.....|.|.|..   
Mouse   334 GEFWMTFEDMCRYFT---------------DIIKCRLINTSYLSIHKTWEEARLHGAWTRHEDPQ 383

  Fly   362 --TAGGCRNH-ESFHINPQLLISV-QDEQDLVIALNQH----TAVEPK----VIGFTMYTWD--G 412
              .:|||.|| ::|..|||.:..| :.|.:::|::.|.    |..|.|    .|||.:|..:  .
Mouse   384 QNRSGGCINHKDTFFQNPQYVFEVKKPEDEVLISIQQRPKRSTRREGKGENLAIGFDIYKVEENR 448

  Fly   413 EYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVR------ 471
            :|.:.....|        ..:|.|.|:|.|...|.|..|.||:||||:||.....|.:|      
Mouse   449 QYRMHSLQHK--------AASSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVP 505

  Fly   472 ------------------------------ILGTGSFRLSCLETQTMILLDPFPALKSTDAERCG 506
                                          :||....:.|.....:.:::            :|.
Mouse   506 SNCRELRLDEPPRTCWSSLCGYPQQVAQVHVLGAAGLKDSPTGANSYVII------------KCE 558

  Fly   507 GPKVKSVCQ 515
            |.||:|..|
Mouse   559 GEKVRSAVQ 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 102/342 (30%)
Calpain_III 346..483 CDD:238132 47/198 (24%)
FRQ1 <567..648 CDD:227455
Capn5XP_006507338.1 Peptidase_C2 40..354 CDD:366222 99/345 (29%)
Calpain_III 365..511 CDD:238132 44/153 (29%)
C2_Calpain 528..651 CDD:176011 9/52 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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