DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and Capn3

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_031627.2 Gene:Capn3 / 12335 MGIID:107437 Length:821 Species:Mus musculus


Alignment Length:792 Identity:215/792 - (27%)
Similarity:354/792 - (44%) Gaps:156/792 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69
            :|::...|..|.||:.||:||..::|:||.|..|..|.|||..::.::            |.|:.
Mouse    61 FEQLRRKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICEN------------PRFII 113

  Fly    70 ESA-EFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEWVEVLV 132
            ..| ..|:..|.:||.|.::.:..|:....|.:||:|.||:....: |:|.|:.|..|:||:|::
Mouse   114 GGANRTDICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVI 178

  Fly   133 DDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGV-----VRQ 192
            ||.|||.|.:|.|.:....|.||:||||||.|||||||||||.|..::.:.|..|||     ::.
Mouse   179 DDCLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKD 243

  Fly   193 MPILSDNIRPQTLKELLTTTCIVTCLAD------------------------------------- 220
            .|  ||..:  .:::.:....::.|..|                                     
Mouse   244 AP--SDMYK--IMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLRDSDL 304

  Fly   221 --------KSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGDSVQLVCLKDTFSSKPFGEK 277
                    .|.|:.......||..|::....|.::.|::. ...|:.|:||.|::     |:|: 
Mouse   305 DPRGSDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEA-LFKGEKVKLVRLRN-----PWGQ- 362

  Fly   278 THFLGDWSPMSKTWERVSQVERARLIRQL-GPGEFWLSFCDFVEIFSTMEVVYLDTETSNDEEML 341
            ..:.|.||...|.|..|.:.|:|||..|: ..||||:|:.|||..|:.:|:..|..:....:::.
Mouse   363 VEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLTADALESDKLQ 427

  Fly   342 KSRPLHWKMKMHQGQWKRGVTAGGCRNH-ESFHINPQLLISVQDEQD----------LVIALNQH 395
            .     |.:.:::|:|.||.:||||||. ::|..|||..:.:.:|.|          .::||.|.
Mouse   428 T-----WTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPEDSEVICSFLVALMQK 487

  Fly   396 TAVEPK-------VIGFTMYTWDGE-YMLSECLQKDFFKNHVSYLNS-DYGNTRHVSYHTHLEAG 451
            ...:.:       .|||.:|....| :...:.||||||..:.|...| .|.|.|.||....|...
Mouse   488 NRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINMREVSQRFRLPPS 552

  Fly   452 HYVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQTMILLD------------------------ 492
            .||::|:||||.:|..|.:|:.  ...|....|.:..|.:|                        
Mouse   553 EYVIVPSTYEPHQEGEFILRVF--SEKRNLSEEAENTISVDRPVKKKKNKPIIFVSDRANSNKEL 615

  Fly   493 ---------------------PFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCFELH 536
                                 |.|....||.|.      :...|:..::.|:|.::..|...||.
Mouse   616 GVDQEAEEGKDKAGPEKRGETPQPRPGHTDQES------EEQQQFRNIFRQIAGDDMEICADELK 674

  Fly   537 ELLEACL--PNDYIKGCANIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKA 599
            .:|...:  ..|.......::.||.:|||.|..||||:..|:|......:|:||.:||.|..:.:
Mouse   675 NVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDHS 739

  Fly   600 GILRAERLRDALCDIGFQLSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNYGQV 664
            |.:.:..:|:|:.|.||.|::.:.:.:..||..|...:....|:...:.|...|..|:..:....
Mouse   740 GTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDKDGD 804

  Fly   665 NVIEVHLHDWIK 676
            .:|::::.:|::
Mouse   805 GIIKLNVLEWLQ 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 113/374 (30%)
Calpain_III 346..483 CDD:238132 50/156 (32%)
FRQ1 <567..648 CDD:227455 23/80 (29%)
Capn3NP_031627.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Peptidase_C2 77..415 CDD:279042 109/360 (30%)
Domain III 418..586 51/174 (29%)
Calpain_III 429..579 CDD:279416 49/151 (32%)
Calpain_u2 583..653 CDD:293254 8/75 (11%)
Linker 587..649 7/67 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..651 5/53 (9%)
Domain IV 650..820 42/167 (25%)
EFh 653..722 CDD:238008 20/68 (29%)
EFh 697..751 CDD:238008 20/53 (38%)
EFh 728..817 CDD:298682 20/89 (22%)
EF-hand_7 728..784 CDD:290234 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.