DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and Capn2

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_033924.2 Gene:Capn2 / 12334 MGIID:88264 Length:700 Species:Mus musculus


Alignment Length:713 Identity:200/713 - (28%)
Similarity:346/713 - (48%) Gaps:82/713 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFT-----FQWKRIMDLADSGSGAVAANSSAA 64
            ||.:.::|.....|::||.|||:.||:.|.:..|::     .:|||..::.            |.
Mouse    32 YETLRNECLEAGALFQDPSFPALPSSLGYKELGPYSSKTRGIEWKRPTEIC------------AD 84

  Fly    65 PVF-LNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQTLASAH-GVFRFRLWWCGEW 127
            |.| :..:...|:..|.:||.||::.:..|:....:..||||.||:....: |:|.|:.|..|||
Mouse    85 PQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPPDQSFQENYAGIFHFQFWQYGEW 149

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGV--- 189
            |||:|||||||.:|.|.|:.....:.||:||||||.||::|.||||..|..::|..|..||:   
Mouse   150 VEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEW 214

  Fly   190 --VRQMPILSDNIRPQTLKE--LLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLD 250
              :|:.|.....|..:.|::  ||..:..:|..||..|...:|         ::....|.::..:
Mouse   215 YELRKPPPNLFKIIQKALEKGSLLGCSIDITSAADSEAVTYQK---------LVKGHAYSVTGAE 270

  Fly   251 KVKTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSF 315
            :|:: .|...:|:.:::     |:|: ..:.|.|:....:|..|....||.|..:...||||:||
Mouse   271 EVES-SGSLQKLIRIRN-----PWGQ-VEWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMSF 328

  Fly   316 CDFVEIFSTMEVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNH-ESFHINPQLL 379
            .||:..:|.:|:..|..:|...:...|     ||:....|.|:||.|||||||: .:|.:|||.|
Mouse   329 SDFLRHYSRLEICNLTPDTLTCDSYKK-----WKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYL 388

  Fly   380 ISV----QDEQD-------LVIALNQHTAVEPKV------IGFTMYTWDGEY--MLSECLQKDFF 425
            |.:    :||:|       ||..:.:|...:.|:      |||.:|....|.  ..:..|.|:||
Mouse   389 IKLEEEDEDEEDGERGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTGQTNIHLGKNFF 453

  Fly   426 KNHVSYLNSD-YGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLSCLETQTMI 489
            ....:...|| :.|.|.|.....|..|.|||:|:|:||.::..|.:|:..........::.:...
Mouse   454 LTTRARERSDTFINLREVLNRFKLPPGEYVLVPSTFEPHKDGDFCIRVFSEKKADYQAVDDEIEA 518

  Fly   490 LLDPFPALKSTDAERCGGPKVKSVCQYEPVYMQLADENKTINCFELHELLEACLP--NDYIKGCA 552
            .::...| ...|.:.          .:..:::|||.|:..|:.|||..:|...|.  .|......
Mouse   519 NIEEIDA-NEEDIDD----------GFRRLFVQLAGEDAEISAFELQTILRRVLAKRQDIKSDGF 572

  Fly   553 NIDICRQVIALQDRSGSGRITFQQFKTFMVNLKSWQGVFKMYTKEKAGILRAERLRDALCDIGFQ 617
            :|:.|:.::.:.|..|||::..::|......::.:|.:::....:::|.:.:..:|.||.:.||:
Mouse   573 SIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK 637

  Fly   618 LSTDIMNCLIQRYIRKDGTLRLSDFVSAVIHLTTAFNQFHLKNYGQVNVIEVHLHDWIK-SIL 679
            |...:...::.|:...:..:...:||..::.|.|.|..|...:......|:::|..|:. |:|
Mouse   638 LPCQLHQVIVARFADDELIIDFDNFVRCLVRLETLFKIFKQLDPENTGTIQLNLASWLSFSVL 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 104/335 (31%)
Calpain_III 346..483 CDD:238132 51/157 (32%)
FRQ1 <567..648 CDD:227455 15/80 (19%)
Capn2NP_033924.2 Peptidase_C2 46..342 CDD:279042 102/323 (32%)
Domain III 345..514 53/173 (31%)
Calpain_III 356..507 CDD:279416 51/150 (34%)
Linker 515..529 1/14 (7%)
Domain IV 530..700 37/179 (21%)
EFh 577..631 CDD:238008 9/53 (17%)
FRQ1 604..>690 CDD:227455 16/85 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2747
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.870

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