DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and CAPN10

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_075571.2 Gene:CAPN10 / 11132 HGNCID:1477 Length:672 Species:Homo sapiens


Alignment Length:605 Identity:155/605 - (25%)
Similarity:240/605 - (39%) Gaps:124/605 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LWEDPDFPAVQSSVFY-YQTPPFTFQ----WKRIMDLADSGSGAVAANSSAAP-VFLNESAEFDV 76
            |:.|..|||..||:|. ..||...|:    |:|..::.            |.| :|.::..|..|
Human    13 LFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQEIC------------ATPRLFPDDPREGQV 65

  Fly    77 VPGKMGDRWLVSCLGLLSSLRNLFYRVVP------ADQTLASAHGVFRFRLWWCGEWVEVLVDDR 135
            ..|.:||.|.:.....|...|:|..:|:|      |||   ...|.|..|:|..|.||||..|||
Human    66 KQGLLGDCWFLCACAALQKSRHLLDQVIPPGQPSWADQ---EYRGSFTCRIWQFGRWVEVTTDDR 127

  Fly   136 LPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPIL---- 196
            ||.:.|||.|.:.|..:.||..||||..||:|||||.|..|..:|.|.||.||:..:..:.    
Human   128 LPCLAGRLCFSRCQREDVFWLPLLEKVYAKVHGSYEHLWAGQVADALVDLTGGLAERWNLKGVAG 192

  Fly   197 --SDNIRP-----QTLKEL--LTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKV 252
              ....||     :|.::|  |...|:::|.. .|.....:.|.|           :....:..:
Human   193 SGGQQDRPGRWEHRTCRQLLHLKDQCLISCCV-LSPRAGARELGE-----------FHAFIVSDL 245

  Fly   253 KTLMGDSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSFCD 317
            :.|.|.:.|.:.|...  ..|:|.:. :.|.|....:.|.:|.....:.|:.||..||||:...:
Human   246 RELQGQAGQCILLLRI--QNPWGRRC-WQGLWREGGEGWSQVDAAVASELLSQLQEGEFWVEEEE 307

  Fly   318 FVEIFSTMEVVYLDTETSNDEEMLKSRPL-HWKMKMHQGQWKRGVTAGGCRNHESFHINPQLLIS 381
            |:..|..:.|.|..||..:.:.:...|.| |  .:...|.|.:|.:||||||:..|..||:..:.
Human   308 FLREFDELTVGY
PVTEAGHLQSLYTERLLCH--TRALPGAWVKGQSAGGCRNNSGFPSNPKFWLR 370

  Fly   382 VQDEQDLVIALNQ--------------------HTAVEP--------KVIGFTMYTWDGEYMLSE 418
            |.:..::.||:.|                    ||:..|        :.:|  ::.|..|     
Human   371 VSEPSEVYIAVLQRSRLHAADWAGRARALVGDSHTSWSPASIPGKHYQAVG--LHLWKVE----- 428

  Fly   419 CLQKDFFKNHVSYL----------NSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRIL 473
                   |..|:..          .:.:...|.|.....|..|:|:.:|:|:.......|.:|:.
Human   429 -------KRRVNLPRVLSMPPVAGTACHAYDREVHLRCELSPGYYLAVPSTFLKDAPGEFLLRVF 486

  Fly   474 GTGSFRLSCLETQTMILLDPFPALKSTD------------AERCGGPKVKSVCQYEPVYMQLADE 526
            .||...||.:..... ...|..||.:.:            .:..||.:..:.....|.:.....|
Human   487 STGRVSLSAIRAVAK-NTTPGAALPAGEWGTVQLRGSWRVGQTAGGSRNFASYPTNPCFPFSVPE 550

  Fly   527 NKTINCFELHELLEACLPND 546
            .....|..: .|.:.|.|:|
Human   551 GPGPRCVRI-TLHQHCRPSD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 100/335 (30%)
Calpain_III 346..483 CDD:238132 39/175 (22%)
FRQ1 <567..648 CDD:227455
CAPN10NP_075571.2 CysPc 2..319 CDD:238004 100/335 (30%)
Domain III 1 322..494 40/187 (21%)
Calpain_III 335..496 CDD:238132 39/176 (22%)
Calpain_III 512..653 CDD:238132 9/59 (15%)
Domain III 2 513..654 9/58 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
54.880

Return to query results.
Submit another query.