DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpC and capn10

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_002935183.3 Gene:capn10 / 100379827 XenbaseID:XB-GENE-5770563 Length:640 Species:Xenopus tropicalis


Alignment Length:508 Identity:135/508 - (26%)
Similarity:223/508 - (43%) Gaps:86/508 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LWEDPDFPAVQSSVFYYQTPPFT-----FQWKRIMDLADSGSGAVAANSSAAPVFLNESAEFDV- 76
            |:.|.||||..||:.:......:     ..|:|.:|:.            |:|...:|....:: 
 Frog     8 LFVDSDFPAHVSSLVHGGDTQLSLHSDNISWQRPLDIC------------ASPSLFSEKNRLNLG 60

  Fly    77 VPGKMGDRWLVSCLGLLSSLRNLFYRVVPADQ---TLASAHGVFRFRLWWCGEWVEVLVDDRLPT 138
            ..|.:||.|.:.....|.....|..:|.||.|   |.::..|.|..|.|..|.||||.:||.||.
 Frog    61 KQGILGDCWFICACTALQKYDRLLGQVFPAGQCTWTNSNYLGQFTCRFWRFGCWVEVTIDDNLPC 125

  Fly   139 INGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILSDNIRPQ 203
            :..:|.|...|....||..|||||.|||||.||||..|..:|.|.||.||:|.:..:.|::.|.:
 Frog   126 LGNKLCFSHCQDQGAFWLPLLEKAYAKLHGCYEALWAGQVADALVDLTGGLVERWSLESEDDRGR 190

  Fly   204 --------TLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMGDSV 260
                    :||:.....|.|....|:...:.:.:.             |.::.:..|.|.....:
 Frog   191 EKLFSKLVSLKDRCAMCCSVLHNRDRVMELGELHA-------------YTITDIQHVVTKSCKDL 242

  Fly   261 QLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARLIRQLGPGEFWLSFCDFVEIFSTM 325
            .|:.|.:     |:| ::.:.|.|......|..::..:.|||:.::..||||:...:|::.|..:
 Frog   243 LLLRLHN-----PWG-RSSWAGSWRKGGDGWNDLNLKDSARLLSEVQEGEFWVEKQEFLQEFDEI 301

  Fly   326 EVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAGGCRNHESFHINPQLLISVQDEQDLVI 390
            .:.:..:...:.:.:....||..|.:.: |.|.:|.:|||.||:.||..||:..:.|::..::.:
 Frog   302 TIAFPYSHEGHLQSIWTDLPLLHKQQFY-GSWVKGYSAGGSRNNVSFPENPKFWLRVKEPSEVFL 365

  Fly   391 ALNQ---------------------HTAVEPKVIGFTMYTWDGEYMLSECLQKDFFK--NHVSYL 432
            :|.|                     |.......:|  ::.|.        ::|..||  ..:|.|
 Frog   366 SLMQIPQGGVKIPEPVHGVYRRNLRHNKTAINAVG--IHVWK--------VEKRRFKLQKTLSSL 420

  Fly   433 ----NSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLS 481
                .|.:...|.:....:|..|:|:|||:.:....|.:|.:|||.||:|.||
 Frog   421 PLAGTSSHCYDRQLHLCCNLSPGYYLLIPSIFLREAEGNFLLRILSTGNFTLS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 91/327 (28%)
Calpain_III 346..483 CDD:238132 43/163 (26%)
FRQ1 <567..648 CDD:227455
capn10XP_002935183.3 Peptidase_C2 9..303 CDD:395523 90/324 (28%)
calpain_III 324..473 CDD:214786 40/159 (25%)
Calpain_III 493..624 CDD:412194
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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