DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpC and capn5b

DIOPT Version :9

Sequence 1:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_009293672.1 Gene:capn5b / 100006332 ZFINID:ZDB-GENE-091116-29 Length:659 Species:Danio rerio


Alignment Length:576 Identity:170/576 - (29%)
Similarity:277/576 - (48%) Gaps:86/576 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69
            |..:...|.....|:|||.||||..|:||.........|||..:|.|.           ..:|::
Zfish    13 YSTLKRQCLQSGALFEDPLFPAVDDSLFYQGNRIGRVHWKRPEELCDD-----------PHLFVD 66

  Fly    70 ESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPA------DQTLASAH-GVFRFRLWWCGEW 127
            ..:..|:..|::|:.|.|:....|:|..:|:.:|:|.      |...|.:: |:|.||.|..|||
Zfish    67 GISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDPEKADSYAGIFHFRFWRFGEW 131

  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQ 192
            |:|::||||||::.:|.:.....||.||:||:|||.||::|.||||..|..:|.|.|..|||...
Zfish   132 VDVVIDDRLPTVDNQLVYCHSNDSNEFWSALVEKAYAKVYGCYEALDGGNTADALVDFTGGVSEP 196

  Fly   193 MPIL------SDNIRPQTLKELL---TTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSS 248
            |.:|      .:..|.|..:.:|   ....:::| :.::.||  :::..|:..|::....|.::.
Zfish   197 MDLLEGQFAQDETARNQLFERVLKVHNRDGLISC-SIRATTV--EDMEARLDCGLVKGHAYAVTD 258

  Fly   249 LDKVKTLMG-------DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARL-IRQ 305
            :.||:...|       :.:.::.:::     |:||| .:.|.||..|:.|::||:.||.:| :..
Zfish   259 VRKVRLGHGLLAYFKSEKLHMIRMRN-----PWGEK-EWSGPWSDSSEEWKKVSKSEREKLGVTV 317

  Fly   306 LGPGEFWLSFCDFVEIFSTM------EVVYLDTETSNDEEMLKSRPLHWKMKMHQGQWKRGVTAG 364
            ...||||::|.||...|:.:      ...||....:.:||:::..   |   :|:.:..|. .||
Zfish   318 QDDGEFWMNFEDFCHYFTDLILCRLINTSYLSIHKTWEEEVMRGL---W---LHRDEPLRN-RAG 375

  Fly   365 GCRNHE-SFHINPQLLISVQD-EQDLVIALNQH----TAVEPK----VIGFTMY--TWDGEYMLS 417
            ||.||: :|..|||.:..|:. |.:::|.|.|.    |..|.|    .|||.::  ..:.:|.:.
Zfish   376 GCINHKTTFLQNPQYVFDVRKVEDEVLICLQQKERRATPKEGKGENLAIGFDIHRVELNRKYRMH 440

  Fly   418 ECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRILGTGSFRLSC 482
            ...||        ...|.|.|:|.|.....|:.|.||:||||::|.::..|.:|:.  ......|
Zfish   441 SAQQK--------VAGSIYINSRCVFLRKELKEGRYVIIPTTFDPGQQGEFLLRVF--TDVPSDC 495

  Fly   483 LETQTMILLDPFPALKSTDAERCGGPK-VKSVCQYEPVYMQLADENKTINCFELHE 537
            .|    :.||..|....|.  .||.|: |..|.......:|..|.|..::|...|:
Zfish   496 KE----LTLDEPPQTCWTG--MCGYPQLVTQVHVLSAEGLQGQDANGELHCLISHK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpCNP_573118.2 CysPc 7..329 CDD:238004 106/351 (30%)
Calpain_III 346..483 CDD:238132 43/148 (29%)
FRQ1 <567..648 CDD:227455
capn5bXP_009293672.1 Peptidase_C2 27..341 CDD:279042 104/333 (31%)
Calpain_III 354..493 CDD:279416 45/155 (29%)
C2_Calpain 515..657 CDD:176011 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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